HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:91.6 nTPM
HPA:91.6 nTPM
GTEx:67.7 nTPM
FANTOM5:126.5 Scaled Tags Per Million
Pig:100.7 nTPM
Mouse:81.4 nTPM
Allen mouse:11.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017087Antibody CAB025786
Glial cells LowNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 91.6
Sample id Sample description nTPM
Hippocampus
nTPM: 87.7
1855 Male, age 76, left hemisphere 95.2
2148 Female, age 91, left hemisphere 94.7
2529 Female, age 94, left hemisphere 92.5
2621 Female, age 67, right hemisphere 84.1
1898 Male, age 80, left hemisphere 83.0
1911 Female, age 85, right hemisphere 76.5
Dentate gyrus
nTPM: 77.7
2530 Female, age 94, left hemisphere 83.9
2246 Female, age 85, both hemispheres 81.6
2528 Male, age 74, both hemispheres 78.2
2531 Female, age 67, both hemispheres 76.6
2010 Male, age 76, both hemispheres 74.8
1927 Female, age 91, both hemispheres 71.4
Entorhinal gyrus
nTPM: 91.6
2613 Female, age 94, left hemisphere 99.0
2686 Male, age 75, right hemisphere 99.0
2117 Female, age 91, right hemisphere 97.4
1787 Male, age 76, left hemisphere 89.6
1938 Female, age 85, left hemisphere 84.6
2764 Male, age 80, right hemisphere 80.1
Hippocampus, CA1
nTPM: 77.6
2527 Male, age 74, both hemispheres 84.9
2045 Male, age 76, both hemispheres 76.4
2749 Male, age 80, left hemisphere 75.9
2082 Female, age 91, right hemisphere 75.8
1873 Female, age 85, both hemispheres 74.9
Hippocampus, CA2
nTPM: 75.6
2437 Female, age 94, left hemisphere 86.8
1892 Male, age 76, both hemispheres 80.7
2113 Female, age 91, right hemisphere 77.0
1963 Male, age 80, left hemisphere 74.6
2249 Male, age 74, both hemispheres 67.6
1940 Female, age 85, left hemisphere 67.1
Hippocampus, CA3
nTPM: 80.4
2861 Female, age 67, both hemispheres 112.3
1867 Male, age 76, both hemispheres 79.6
2620 Female, age 94, left hemisphere 78.3
2137 Male, age 80, left hemisphere 76.4
1891 Female, age 85, both hemispheres 72.3
2436 Male, age 74, both hemispheres 63.3
Parahippocampal cortex
nTPM: 78.9
2692 Male, age 74, both hemispheres 92.4
2622 Female, age 67, right hemisphere 86.1
2018 Male, age 76, both hemispheres 81.5
2250 Female, age 67, right hemisphere 80.4
1933 Female, age 85, both hemispheres 80.1
2245 Female, age 91, both hemispheres 78.4
2693 Female, age 94, both hemispheres 77.9
1990 Female, age 91, right hemisphere 71.5
2532 Female, age 72, left hemisphere 70.4
1850 Male, age 80, both hemispheres 70.2
Perirhinal gyrus
nTPM: 76.0
2521 Female, age 94, right hemisphere 90.7
1847 Female, age 91, left hemisphere 82.9
1794 Male, age 80, right hemisphere 71.2
2848 Male, age 76, right hemisphere 67.8
1841 Female, age 85, right hemisphere 67.2
Subiculum
nTPM: 81.7
2438 Female, age 94, left hemisphere 88.7
2729 Female, age 91, right hemisphere 87.5
2619 Male, age 74, both hemispheres 81.6
1977 Female, age 85, both hemispheres 78.8
1901 Male, age 80, both hemispheres 78.1
2042 Male, age 76, both hemispheres 75.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 67.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 67.7
Samples: 197

Max nTPM: 138.1
Min nTPM: 24.7
Std nTPM: 20.2
Median nTPM: 66.3
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 138.1
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 124.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 124.3
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 124.1
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 114.6
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 112.8
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 112.8
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 108.0
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 105.7
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 105.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 104.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 126.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 126.5
FF:10153-102I9 76 years, female 142.1
FF:10169-103B7 60 years, female 110.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 100.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 55.2
Samples: 4

Max nTPM: 63.4
Min nTPM: 41.5
Sample A Female 62.8
Sample B Female 63.4
Sample C Male 53.2
Sample D Male 41.5
Entorhinal cortex
nTPM: 100.7
Samples: 4

Max nTPM: 122.1
Min nTPM: 76.7
Sample A Female 115.0
Sample B Female 76.7
Sample C Male 122.1
Sample D Male 89.1
Subiculum
nTPM: 86.4
Samples: 4

Max nTPM: 115.4
Min nTPM: 71.4
Sample A Female 115.4
Sample B Female 77.9
Sample C Male 80.7
Sample D Male 71.4
Ventral hippocampus
nTPM: 71.4
Samples: 4

Max nTPM: 103.5
Min nTPM: 53.1
Sample A Female 68.6
Sample B Female 53.1
Sample C Male 103.5
Sample D Male 60.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 81.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 81.4
Samples: 4

Max nTPM: 106.7
Min nTPM: 72.6
Sample A Male 73.4
Sample B Male 72.6
Sample C Female 72.7
Sample D Female 106.7
Hippocampal formation
nTPM: 61.4
Samples: 4

Max nTPM: 62.9
Min nTPM: 59.5
Sample A Male 59.5
Sample B Male 62.9
Sample C Female 61.0
Sample D Female 62.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.4
68845287 Antisense, RP_050224_01_E03, Mouse strain C57BL/6J (56 days, male) 12.3
71358662 Antisense, RP_050725_03_F12, Mouse strain C57BL/6J (56 days, male) 10.5

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