HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:52.0 nTPM
HPA:52.0 nTPM
GTEx:69.0 nTPM
FANTOM5:48.4 Scaled Tags Per Million
Pig:13.1 nTPM
Mouse:52.2 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027641
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 52.0
Sample id Sample description nTPM
Hippocampus
nTPM: 49.3
1898 Male, age 80, left hemisphere 54.2
2529 Female, age 94, left hemisphere 51.1
2621 Female, age 67, right hemisphere 48.7
2148 Female, age 91, left hemisphere 48.1
1911 Female, age 85, right hemisphere 47.0
1855 Male, age 76, left hemisphere 46.4
Dentate gyrus
nTPM: 50.3
2530 Female, age 94, left hemisphere 54.8
2010 Male, age 76, both hemispheres 52.2
2528 Male, age 74, both hemispheres 50.6
1927 Female, age 91, both hemispheres 50.2
2246 Female, age 85, both hemispheres 48.1
2531 Female, age 67, both hemispheres 45.7
Entorhinal gyrus
nTPM: 49.7
2764 Male, age 80, right hemisphere 53.9
1787 Male, age 76, left hemisphere 52.2
1938 Female, age 85, left hemisphere 51.1
2613 Female, age 94, left hemisphere 48.3
2117 Female, age 91, right hemisphere 47.9
2686 Male, age 75, right hemisphere 45.1
Hippocampus, CA1
nTPM: 51.8
2749 Male, age 80, left hemisphere 59.1
2527 Male, age 74, both hemispheres 51.9
1873 Female, age 85, both hemispheres 49.7
2045 Male, age 76, both hemispheres 49.2
2082 Female, age 91, right hemisphere 49.2
Hippocampus, CA2
nTPM: 50.5
2249 Male, age 74, both hemispheres 53.3
1963 Male, age 80, left hemisphere 53.2
1892 Male, age 76, both hemispheres 50.7
2437 Female, age 94, left hemisphere 50.2
2113 Female, age 91, right hemisphere 48.7
1940 Female, age 85, left hemisphere 47.1
Hippocampus, CA3
nTPM: 50.7
2137 Male, age 80, left hemisphere 55.7
2436 Male, age 74, both hemispheres 51.9
2620 Female, age 94, left hemisphere 51.6
1867 Male, age 76, both hemispheres 51.3
2861 Female, age 67, both hemispheres 47.5
1891 Female, age 85, both hemispheres 46.3
Parahippocampal cortex
nTPM: 49.3
2250 Female, age 67, right hemisphere 53.0
2245 Female, age 91, both hemispheres 51.9
1990 Female, age 91, right hemisphere 51.3
1933 Female, age 85, both hemispheres 50.1
1850 Male, age 80, both hemispheres 49.8
2018 Male, age 76, both hemispheres 48.9
2532 Female, age 72, left hemisphere 48.3
2692 Male, age 74, both hemispheres 47.3
2622 Female, age 67, right hemisphere 46.4
2693 Female, age 94, both hemispheres 46.3
Perirhinal gyrus
nTPM: 52.0
1794 Male, age 80, right hemisphere 56.6
1847 Female, age 91, left hemisphere 54.8
2521 Female, age 94, right hemisphere 51.3
1841 Female, age 85, right hemisphere 51.2
2848 Male, age 76, right hemisphere 46.3
Subiculum
nTPM: 48.1
1977 Female, age 85, both hemispheres 52.1
2619 Male, age 74, both hemispheres 50.0
1901 Male, age 80, both hemispheres 49.5
2042 Male, age 76, both hemispheres 47.7
2729 Female, age 91, right hemisphere 47.4
2438 Female, age 94, left hemisphere 41.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 69.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 69.0
Samples: 197

Max nTPM: 161.0
Min nTPM: 28.9
Std nTPM: 22.6
Median nTPM: 66.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 161.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 147.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 143.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 141.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 131.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 127.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 125.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 124.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 121.5
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 112.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 107.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 48.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 48.4
FF:10169-103B7 60 years, female 66.9
FF:10153-102I9 76 years, female 29.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.1
Samples: 4

Max nTPM: 17.2
Min nTPM: 10.3
Sample A Female 17.2
Sample B Female 12.8
Sample C Male 12.1
Sample D Male 10.3
Entorhinal cortex
nTPM: 10.1
Samples: 4

Max nTPM: 11.5
Min nTPM: 8.1
Sample A Female 10.3
Sample B Female 11.5
Sample C Male 10.4
Sample D Male 8.1
Subiculum
nTPM: 10.5
Samples: 4

Max nTPM: 13.9
Min nTPM: 8.8
Sample A Female 13.9
Sample B Female 9.8
Sample C Male 9.3
Sample D Male 8.8
Ventral hippocampus
nTPM: 11.4
Samples: 4

Max nTPM: 12.9
Min nTPM: 8.3
Sample A Female 12.9
Sample B Female 8.3
Sample C Male 12.4
Sample D Male 12.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 52.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 48.4
Samples: 4

Max nTPM: 52.5
Min nTPM: 44.8
Sample A Male 49.7
Sample B Male 52.5
Sample C Female 46.5
Sample D Female 44.8
Hippocampal formation
nTPM: 52.2
Samples: 4

Max nTPM: 60.0
Min nTPM: 43.5
Sample A Male 60.0
Sample B Male 43.5
Sample C Female 53.0
Sample D Female 52.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
68545477 Antisense, RP_050120_01_A06, Mouse strain C57BL/6J (56 days, male) 2.0

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