HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:176.0 nTPM
HPA:176.0 nTPM
GTEx:167.7 nTPM
FANTOM5:201.1 Scaled Tags Per Million
Pig:315.0 nTPM
Mouse:420.8 nTPM
Allen mouse:20.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB018702Antibody CAB069993
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 176.0
Sample id Sample description nTPM
Hippocampus
nTPM: 126.8
1898 Male, age 80, left hemisphere 163.1
2621 Female, age 67, right hemisphere 153.7
2148 Female, age 91, left hemisphere 137.0
1855 Male, age 76, left hemisphere 120.0
1911 Female, age 85, right hemisphere 106.7
2529 Female, age 94, left hemisphere 80.3
Dentate gyrus
nTPM: 157.8
1927 Female, age 91, both hemispheres 245.9
2530 Female, age 94, left hemisphere 162.0
2531 Female, age 67, both hemispheres 153.4
2010 Male, age 76, both hemispheres 151.7
2246 Female, age 85, both hemispheres 124.6
2528 Male, age 74, both hemispheres 109.5
Entorhinal gyrus
nTPM: 101.0
2613 Female, age 94, left hemisphere 127.2
2764 Male, age 80, right hemisphere 123.1
1938 Female, age 85, left hemisphere 102.9
1787 Male, age 76, left hemisphere 102.2
2686 Male, age 75, right hemisphere 79.8
2117 Female, age 91, right hemisphere 71.1
Hippocampus, CA1
nTPM: 176.0
2749 Male, age 80, left hemisphere 331.4
1873 Female, age 85, both hemispheres 191.0
2045 Male, age 76, both hemispheres 168.8
2527 Male, age 74, both hemispheres 104.6
2082 Female, age 91, right hemisphere 84.5
Hippocampus, CA2
nTPM: 128.3
1963 Male, age 80, left hemisphere 212.6
1892 Male, age 76, both hemispheres 169.6
2249 Male, age 74, both hemispheres 110.8
2437 Female, age 94, left hemisphere 102.1
1940 Female, age 85, left hemisphere 95.0
2113 Female, age 91, right hemisphere 79.7
Hippocampus, CA3
nTPM: 159.5
2620 Female, age 94, left hemisphere 267.0
2137 Male, age 80, left hemisphere 183.1
1867 Male, age 76, both hemispheres 141.3
2436 Male, age 74, both hemispheres 137.0
2861 Female, age 67, both hemispheres 115.5
1891 Female, age 85, both hemispheres 113.0
Parahippocampal cortex
nTPM: 104.3
1850 Male, age 80, both hemispheres 140.4
2693 Female, age 94, both hemispheres 119.5
1990 Female, age 91, right hemisphere 116.4
1933 Female, age 85, both hemispheres 109.9
2245 Female, age 91, both hemispheres 107.3
2532 Female, age 72, left hemisphere 107.0
2250 Female, age 67, right hemisphere 101.7
2018 Male, age 76, both hemispheres 97.0
2622 Female, age 67, right hemisphere 72.1
2692 Male, age 74, both hemispheres 71.9
Perirhinal gyrus
nTPM: 137.3
1794 Male, age 80, right hemisphere 158.3
1847 Female, age 91, left hemisphere 148.4
1841 Female, age 85, right hemisphere 146.2
2521 Female, age 94, right hemisphere 125.9
2848 Male, age 76, right hemisphere 107.5
Subiculum
nTPM: 95.5
1901 Male, age 80, both hemispheres 120.5
1977 Female, age 85, both hemispheres 102.1
2042 Male, age 76, both hemispheres 97.6
2729 Female, age 91, right hemisphere 90.3
2438 Female, age 94, left hemisphere 83.9
2619 Male, age 74, both hemispheres 78.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 167.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 167.7
Samples: 197

Max nTPM: 461.5
Min nTPM: 53.7
Std nTPM: 95.1
Median nTPM: 133.7
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 461.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 425.7
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 423.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 419.9
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 416.4
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 406.9
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 394.4
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 389.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 387.1
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 381.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 378.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 201.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 201.1
FF:10169-103B7 60 years, female 238.5
FF:10153-102I9 76 years, female 163.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 315.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 291.6
Samples: 4

Max nTPM: 355.1
Min nTPM: 222.6
Sample A Female 355.1
Sample B Female 318.8
Sample C Male 222.6
Sample D Male 269.7
Entorhinal cortex
nTPM: 315.0
Samples: 4

Max nTPM: 380.4
Min nTPM: 270.9
Sample A Female 380.4
Sample B Female 337.3
Sample C Male 270.9
Sample D Male 271.5
Subiculum
nTPM: 176.6
Samples: 4

Max nTPM: 237.9
Min nTPM: 144.9
Sample A Female 237.9
Sample B Female 144.9
Sample C Male 168.9
Sample D Male 154.8
Ventral hippocampus
nTPM: 247.4
Samples: 4

Max nTPM: 302.0
Min nTPM: 146.8
Sample A Female 250.8
Sample B Female 146.8
Sample C Male 290.1
Sample D Male 302.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 420.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 420.8
Samples: 4

Max nTPM: 518.7
Min nTPM: 317.9
Sample A Male 441.3
Sample B Male 518.7
Sample C Female 317.9
Sample D Female 405.4
Hippocampal formation
nTPM: 312.3
Samples: 4

Max nTPM: 335.5
Min nTPM: 277.8
Sample A Male 277.8
Sample B Male 335.5
Sample C Female 326.5
Sample D Female 309.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 20.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 20.1
71836844 Antisense, RP_051017_02_C07, Mouse strain C57BL/6J (56 days, male) 22.3
68157413 Antisense, RP_041116_02_F06, Mouse strain C57BL/6J (56 days, male) 19.1
100055045 Antisense, RP_080110_01_A05, Mouse strain C57BL/6J (56 days, male) 18.7
100055054 Antisense, RP_080110_01_A05, Mouse strain C57BL/6J (56 days, male) 17.9
100055069 Antisense, RP_080110_01_A05, Mouse strain C57BL/6J (56 days, male) 15.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.