HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:82.5 nTPM
HPA:82.5 nTPM
GTEx:74.0 nTPM
FANTOM5:19.1 Scaled Tags Per Million
Pig:27.1 nTPM
Mouse:134.3 nTPM
Allen mouse:13.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 82.5
Sample id Sample description nTPM
Hippocampus
nTPM: 75.9
1911 Female, age 85, right hemisphere 77.5
2529 Female, age 94, left hemisphere 77.4
1898 Male, age 80, left hemisphere 76.7
2621 Female, age 67, right hemisphere 75.8
1855 Male, age 76, left hemisphere 73.9
2148 Female, age 91, left hemisphere 73.9
Dentate gyrus
nTPM: 74.7
2530 Female, age 94, left hemisphere 86.2
2528 Male, age 74, both hemispheres 75.9
2010 Male, age 76, both hemispheres 75.5
2246 Female, age 85, both hemispheres 71.0
2531 Female, age 67, both hemispheres 70.1
1927 Female, age 91, both hemispheres 69.6
Entorhinal gyrus
nTPM: 82.5
2117 Female, age 91, right hemisphere 94.1
2764 Male, age 80, right hemisphere 90.0
2613 Female, age 94, left hemisphere 78.4
2686 Male, age 75, right hemisphere 78.4
1938 Female, age 85, left hemisphere 77.5
1787 Male, age 76, left hemisphere 76.4
Hippocampus, CA1
nTPM: 72.5
2527 Male, age 74, both hemispheres 76.0
2082 Female, age 91, right hemisphere 75.8
1873 Female, age 85, both hemispheres 74.0
2749 Male, age 80, left hemisphere 71.1
2045 Male, age 76, both hemispheres 65.3
Hippocampus, CA2
nTPM: 77.1
1963 Male, age 80, left hemisphere 82.6
2437 Female, age 94, left hemisphere 78.7
1940 Female, age 85, left hemisphere 76.7
2249 Male, age 74, both hemispheres 76.4
2113 Female, age 91, right hemisphere 74.9
1892 Male, age 76, both hemispheres 73.6
Hippocampus, CA3
nTPM: 71.1
1891 Female, age 85, both hemispheres 81.1
1867 Male, age 76, both hemispheres 74.3
2436 Male, age 74, both hemispheres 70.6
2861 Female, age 67, both hemispheres 67.6
2620 Female, age 94, left hemisphere 66.5
2137 Male, age 80, left hemisphere 66.4
Parahippocampal cortex
nTPM: 76.5
2692 Male, age 74, both hemispheres 85.8
2532 Female, age 72, left hemisphere 82.6
1990 Female, age 91, right hemisphere 79.7
2018 Male, age 76, both hemispheres 77.4
1850 Male, age 80, both hemispheres 77.3
1933 Female, age 85, both hemispheres 77.0
2245 Female, age 91, both hemispheres 75.8
2622 Female, age 67, right hemisphere 71.6
2693 Female, age 94, both hemispheres 71.1
2250 Female, age 67, right hemisphere 67.1
Perirhinal gyrus
nTPM: 72.7
1794 Male, age 80, right hemisphere 76.6
2521 Female, age 94, right hemisphere 72.9
1847 Female, age 91, left hemisphere 72.3
1841 Female, age 85, right hemisphere 71.2
2848 Male, age 76, right hemisphere 70.5
Subiculum
nTPM: 81.7
1901 Male, age 80, both hemispheres 86.3
2042 Male, age 76, both hemispheres 84.2
2619 Male, age 74, both hemispheres 82.8
2438 Female, age 94, left hemisphere 80.5
1977 Female, age 85, both hemispheres 80.2
2729 Female, age 91, right hemisphere 76.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 74.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 74.0
Samples: 197

Max nTPM: 153.7
Min nTPM: 15.3
Std nTPM: 23.1
Median nTPM: 71.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 153.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 140.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 137.9
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 129.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 127.9
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 127.6
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 119.3
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 118.6
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 116.1
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 115.0
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 114.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.1
FF:10153-102I9 76 years, female 22.5
FF:10169-103B7 60 years, female 15.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 27.2
Samples: 4

Max nTPM: 35.6
Min nTPM: 15.5
Sample A Female 35.6
Sample B Female 26.3
Sample C Male 31.2
Sample D Male 15.5
Entorhinal cortex
nTPM: 24.3
Samples: 4

Max nTPM: 27.9
Min nTPM: 19.0
Sample A Female 22.8
Sample B Female 27.5
Sample C Male 27.9
Sample D Male 19.0
Subiculum
nTPM: 21.1
Samples: 4

Max nTPM: 25.1
Min nTPM: 18.2
Sample A Female 25.1
Sample B Female 21.2
Sample C Male 20.0
Sample D Male 18.2
Ventral hippocampus
nTPM: 23.3
Samples: 4

Max nTPM: 30.3
Min nTPM: 16.1
Sample A Female 20.9
Sample B Female 16.1
Sample C Male 25.9
Sample D Male 30.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 134.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 134.3
Samples: 4

Max nTPM: 137.2
Min nTPM: 129.1
Sample A Male 129.1
Sample B Male 135.5
Sample C Female 137.2
Sample D Female 135.3
Hippocampal formation
nTPM: 120.6
Samples: 4

Max nTPM: 131.3
Min nTPM: 110.0
Sample A Male 131.3
Sample B Male 110.0
Sample C Female 111.4
Sample D Female 129.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.9
69080509 Antisense, RP_050324_02_B10, Mouse strain C57BL/6J (56 days, male) 13.9

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