HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:162.0 nTPM
HPA:162.0 nTPM
GTEx:135.5 nTPM
FANTOM5:98.6 Scaled Tags Per Million
Pig:50.0 nTPM
Mouse:206.4 nTPM
Allen mouse:12.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001565Antibody HPA056092
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 162.0
Sample id Sample description nTPM
Hippocampus
nTPM: 101.9
1898 Male, age 80, left hemisphere 121.3
1911 Female, age 85, right hemisphere 105.8
2621 Female, age 67, right hemisphere 104.0
2529 Female, age 94, left hemisphere 98.7
1855 Male, age 76, left hemisphere 94.8
2148 Female, age 91, left hemisphere 87.0
Dentate gyrus
nTPM: 100.4
2246 Female, age 85, both hemispheres 107.6
2530 Female, age 94, left hemisphere 107.5
2010 Male, age 76, both hemispheres 100.7
1927 Female, age 91, both hemispheres 100.5
2528 Male, age 74, both hemispheres 95.5
2531 Female, age 67, both hemispheres 90.5
Entorhinal gyrus
nTPM: 130.1
1787 Male, age 76, left hemisphere 155.3
2764 Male, age 80, right hemisphere 141.2
1938 Female, age 85, left hemisphere 140.7
2613 Female, age 94, left hemisphere 134.3
2686 Male, age 75, right hemisphere 106.3
2117 Female, age 91, right hemisphere 102.6
Hippocampus, CA1
nTPM: 102.9
2749 Male, age 80, left hemisphere 128.5
2527 Male, age 74, both hemispheres 101.2
1873 Female, age 85, both hemispheres 97.6
2082 Female, age 91, right hemisphere 97.3
2045 Male, age 76, both hemispheres 89.9
Hippocampus, CA2
nTPM: 113.9
1892 Male, age 76, both hemispheres 140.9
1940 Female, age 85, left hemisphere 119.2
2437 Female, age 94, left hemisphere 112.2
1963 Male, age 80, left hemisphere 104.8
2249 Male, age 74, both hemispheres 103.6
2113 Female, age 91, right hemisphere 102.4
Hippocampus, CA3
nTPM: 110.2
1867 Male, age 76, both hemispheres 133.1
2137 Male, age 80, left hemisphere 128.9
1891 Female, age 85, both hemispheres 116.5
2436 Male, age 74, both hemispheres 102.3
2620 Female, age 94, left hemisphere 91.8
2861 Female, age 67, both hemispheres 88.9
Parahippocampal cortex
nTPM: 130.4
1850 Male, age 80, both hemispheres 161.3
1933 Female, age 85, both hemispheres 151.2
2250 Female, age 67, right hemisphere 140.0
1990 Female, age 91, right hemisphere 131.0
2532 Female, age 72, left hemisphere 130.2
2018 Male, age 76, both hemispheres 128.5
2693 Female, age 94, both hemispheres 127.8
2245 Female, age 91, both hemispheres 118.8
2622 Female, age 67, right hemisphere 112.8
2692 Male, age 74, both hemispheres 102.3
Perirhinal gyrus
nTPM: 162.0
1841 Female, age 85, right hemisphere 177.2
1794 Male, age 80, right hemisphere 169.1
2848 Male, age 76, right hemisphere 165.6
1847 Female, age 91, left hemisphere 154.9
2521 Female, age 94, right hemisphere 143.4
Subiculum
nTPM: 115.0
1977 Female, age 85, both hemispheres 140.4
1901 Male, age 80, both hemispheres 130.1
2438 Female, age 94, left hemisphere 113.9
2042 Male, age 76, both hemispheres 111.4
2619 Male, age 74, both hemispheres 104.9
2729 Female, age 91, right hemisphere 89.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 135.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 135.5
Samples: 197

Max nTPM: 911.4
Min nTPM: 25.2
Std nTPM: 94.4
Median nTPM: 109.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 911.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 457.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 433.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 394.8
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 360.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 333.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 311.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 308.3
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 301.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 291.1
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 287.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 98.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 98.6
FF:10169-103B7 60 years, female 110.9
FF:10153-102I9 76 years, female 86.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 50.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 38.9
Samples: 4

Max nTPM: 46.3
Min nTPM: 32.9
Sample A Female 38.2
Sample B Female 46.3
Sample C Male 38.3
Sample D Male 32.9
Entorhinal cortex
nTPM: 38.9
Samples: 4

Max nTPM: 49.2
Min nTPM: 32.7
Sample A Female 35.5
Sample B Female 32.7
Sample C Male 49.2
Sample D Male 38.1
Subiculum
nTPM: 50.1
Samples: 4

Max nTPM: 55.6
Min nTPM: 46.1
Sample A Female 49.9
Sample B Female 46.1
Sample C Male 55.6
Sample D Male 48.6
Ventral hippocampus
nTPM: 43.4
Samples: 4

Max nTPM: 47.4
Min nTPM: 39.3
Sample A Female 47.4
Sample B Female 43.5
Sample C Male 39.3
Sample D Male 43.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 206.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 206.4
Samples: 4

Max nTPM: 228.4
Min nTPM: 193.5
Sample A Male 193.5
Sample B Male 228.4
Sample C Female 205.3
Sample D Female 198.5
Hippocampal formation
nTPM: 125.5
Samples: 4

Max nTPM: 171.8
Min nTPM: 94.1
Sample A Male 171.8
Sample B Male 114.9
Sample C Female 94.1
Sample D Female 121.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.3
69117449 Antisense, RP_050330_01_B08, Mouse strain C57BL/6J (56 days, male) 14.7
963 Antisense, RP_040324_01_A03, Mouse strain C57BL/6J (56 days, male) 9.9
964 Antisense, RP_040324_01_A03, Mouse strain C57BL/6J (56 days, male) 5.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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