HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:61.5 nTPM
HPA:61.5 nTPM
GTEx:77.9 nTPM
FANTOM5:34.8 Scaled Tags Per Million
Pig:37.7 nTPM
Mouse:65.0 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044143
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 61.5
Sample id Sample description nTPM
Hippocampus
nTPM: 58.3
1898 Male, age 80, left hemisphere 63.4
1855 Male, age 76, left hemisphere 59.7
2621 Female, age 67, right hemisphere 58.3
1911 Female, age 85, right hemisphere 57.7
2529 Female, age 94, left hemisphere 57.0
2148 Female, age 91, left hemisphere 53.8
Dentate gyrus
nTPM: 57.2
1927 Female, age 91, both hemispheres 61.3
2010 Male, age 76, both hemispheres 58.3
2531 Female, age 67, both hemispheres 56.6
2530 Female, age 94, left hemisphere 56.4
2246 Female, age 85, both hemispheres 56.1
2528 Male, age 74, both hemispheres 54.5
Entorhinal gyrus
nTPM: 56.0
1938 Female, age 85, left hemisphere 59.8
2686 Male, age 75, right hemisphere 56.6
1787 Male, age 76, left hemisphere 56.1
2613 Female, age 94, left hemisphere 55.5
2764 Male, age 80, right hemisphere 55.2
2117 Female, age 91, right hemisphere 53.1
Hippocampus, CA1
nTPM: 61.1
2749 Male, age 80, left hemisphere 72.3
1873 Female, age 85, both hemispheres 62.1
2527 Male, age 74, both hemispheres 59.5
2045 Male, age 76, both hemispheres 57.5
2082 Female, age 91, right hemisphere 53.9
Hippocampus, CA2
nTPM: 58.1
1892 Male, age 76, both hemispheres 63.2
1963 Male, age 80, left hemisphere 62.5
2249 Male, age 74, both hemispheres 57.5
2437 Female, age 94, left hemisphere 56.8
1940 Female, age 85, left hemisphere 55.4
2113 Female, age 91, right hemisphere 53.4
Hippocampus, CA3
nTPM: 57.6
2137 Male, age 80, left hemisphere 65.7
1867 Male, age 76, both hemispheres 59.9
1891 Female, age 85, both hemispheres 56.7
2436 Male, age 74, both hemispheres 55.1
2861 Female, age 67, both hemispheres 54.0
2620 Female, age 94, left hemisphere 53.8
Parahippocampal cortex
nTPM: 58.2
1850 Male, age 80, both hemispheres 65.3
1933 Female, age 85, both hemispheres 59.5
2245 Female, age 91, both hemispheres 59.4
2693 Female, age 94, both hemispheres 58.8
1990 Female, age 91, right hemisphere 57.6
2532 Female, age 72, left hemisphere 57.6
2018 Male, age 76, both hemispheres 57.1
2250 Female, age 67, right hemisphere 56.9
2622 Female, age 67, right hemisphere 55.3
2692 Male, age 74, both hemispheres 54.7
Perirhinal gyrus
nTPM: 61.5
1794 Male, age 80, right hemisphere 64.3
1841 Female, age 85, right hemisphere 64.2
1847 Female, age 91, left hemisphere 60.7
2521 Female, age 94, right hemisphere 59.3
2848 Male, age 76, right hemisphere 58.9
Subiculum
nTPM: 56.1
1901 Male, age 80, both hemispheres 61.4
2438 Female, age 94, left hemisphere 57.6
1977 Female, age 85, both hemispheres 56.5
2042 Male, age 76, both hemispheres 54.6
2619 Male, age 74, both hemispheres 53.8
2729 Female, age 91, right hemisphere 52.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 77.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 77.9
Samples: 197

Max nTPM: 233.8
Min nTPM: 32.7
Std nTPM: 25.1
Median nTPM: 75.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 233.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 211.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 140.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 135.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 133.6
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 132.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 125.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 123.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 122.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 121.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 118.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.8
FF:10169-103B7 60 years, female 46.0
FF:10153-102I9 76 years, female 23.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 37.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 37.0
Samples: 4

Max nTPM: 43.1
Min nTPM: 33.0
Sample A Female 43.1
Sample B Female 34.4
Sample C Male 37.3
Sample D Male 33.0
Entorhinal cortex
nTPM: 37.7
Samples: 4

Max nTPM: 46.6
Min nTPM: 32.7
Sample A Female 34.3
Sample B Female 46.6
Sample C Male 37.0
Sample D Male 32.7
Subiculum
nTPM: 33.7
Samples: 4

Max nTPM: 43.6
Min nTPM: 27.9
Sample A Female 43.6
Sample B Female 32.0
Sample C Male 27.9
Sample D Male 31.3
Ventral hippocampus
nTPM: 30.4
Samples: 4

Max nTPM: 35.0
Min nTPM: 26.7
Sample A Female 32.4
Sample B Female 27.6
Sample C Male 26.7
Sample D Male 35.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 65.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 53.4
Samples: 4

Max nTPM: 59.1
Min nTPM: 47.2
Sample A Male 49.9
Sample B Male 59.1
Sample C Female 57.2
Sample D Female 47.2
Hippocampal formation
nTPM: 65.1
Samples: 4

Max nTPM: 80.9
Min nTPM: 58.9
Sample A Male 80.9
Sample B Male 58.9
Sample C Female 61.1
Sample D Female 59.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
69014536 Antisense, RP_050310_01_C09, Mouse strain C57BL/6J (56 days, male) 1.3

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