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A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
Protein expressioni
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 1561.7
Min nTPM: 13.5
Std nTPM: 299.4
Median nTPM:
491_1
89 years, female
1561.7
265_1
87 years, male
1107.3
32_1
67 years, male
974.2
347_1
72 years, male
931.4
177_1
74 years, male
797.6
480_1
63 years, male
776.3
406_1
79 years, male
751.1
495_1
57 years, female
720.3
356_1
87 years, female
661.3
413_1
59 years, female
647.2
466_1
57 years, female
607.8
153_1
70 years, female
593.5
315_1
62 years, female
585.9
501_1
88 years, male
582.6
389_1
86 years, female
573.9
415_1
77 years, female
558.8
126_1
63 years, male
553.5
217_1
76 years, male
553.3
162_1
79 years, female
550.9
379_1
60 years, male
550.5
35_1
74 years, female
545.5
189_1
76 years, male
538.4
396_1
62 years, male
534.2
81_1
67 years, male
521.1
452_1
88 years, female
513.2
4_1
88 years, female
501.9
375_1
74 years, female
500.4
499_1
55 years, female
487.0
18_1
88 years, male
486.4
518_1
75 years, female
481.2
386_1
76 years, male
480.7
119_1
70 years, female
474.6
42_1
85 years, male
473.2
447_1
81 years, male
472.3
6_1
73 years, female
471.8
314_1
67 years, male
466.7
394_1
75 years, female
459.9
348_1
84 years, male
454.5
117_1
61 years, male
454.3
41_1
94 years, female
452.5
266_1
85 years, male
439.2
251_1
78 years, male
435.9
173_1
67 years, male
434.4
354_1
81 years, female
430.9
376_1
75 years, female
429.7
335_1
73 years, female
421.6
264_1
73 years, female
420.8
286_1
68 years, female
419.8
351_1
91 years, male
402.8
319_1
81 years, male
400.8
316_1
62 years, male
400.6
352_1
62 years, male
398.4
517_1
88 years, male
393.1
317_1
60 years, male
390.2
295_1
61 years, female
382.0
9_1
66 years, female
356.9
293_1
68 years, female
348.7
350_1
84 years, female
348.1
506_1
65 years, male
323.0
218_1
71 years, female
33.6
308_1
70 years, female
31.9
414_1
84 years, female
31.8
503_1
68 years, male
30.0
490_1
67 years, female
29.5
246_1
77 years, male
29.3
307_1
66 years, female
27.6
384_1
83 years, male
27.3
311_1
78 years, male
27.0
17_1
71 years, male
26.7
322_1
76 years, male
25.6
229_1
69 years, female
24.3
321_1
62 years, female
24.3
292_1
71 years, male
23.5
404_1
82 years, female
23.4
243_1
75 years, male
23.3
425_1
59 years, female
23.3
139_1
64 years, female
23.1
377_1
82 years, female
22.9
349_1
83 years, male
22.8
288_1
66 years, female
22.4
355_1
70 years, female
22.4
2_1
77 years, female
21.5
145_1
84 years, male
21.3
237_1
82 years, male
21.0
468_1
89 years, male
20.9
115_1
83 years, male
20.8
313_1
79 years, female
20.7
353_1
82 years, female
20.4
405_1
91 years, male
20.4
109_1
81 years, female
19.5
526_1
61 years, male
19.5
43_1
64 years, female
18.6
324_1
76 years, male
18.2
142_1
61 years, female
17.5
120_1
70 years, female
16.6
99_1
64 years, male
16.1
320_1
89 years, female
16.1
89_1
63 years, male
16.0
254_1
77 years, female
15.8
318_1
68 years, male
15.7
137_1
83 years, male
15.5
163_1
78 years, male
14.3
149_1
88 years, male
14.2
291_1
76 years, male
13.8
172_1
72 years, female
13.5
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.