HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:101.1 nTPM
HPA:101.1 nTPM
GTEx:65.4 nTPM
FANTOM5:225.2 Scaled Tags Per Million
Pig:32.0 nTPM
Mouse:9.1 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 101.1
Sample id Sample description nTPM
Hippocampus
nTPM: 63.3
1911 Female, age 85, right hemisphere 81.6
2529 Female, age 94, left hemisphere 78.8
2621 Female, age 67, right hemisphere 62.4
1898 Male, age 80, left hemisphere 54.3
1855 Male, age 76, left hemisphere 53.0
2148 Female, age 91, left hemisphere 49.4
Dentate gyrus
nTPM: 69.2
2530 Female, age 94, left hemisphere 98.0
2010 Male, age 76, both hemispheres 91.0
2528 Male, age 74, both hemispheres 81.4
2246 Female, age 85, both hemispheres 55.8
2531 Female, age 67, both hemispheres 46.0
1927 Female, age 91, both hemispheres 42.8
Entorhinal gyrus
nTPM: 68.3
2117 Female, age 91, right hemisphere 113.9
2764 Male, age 80, right hemisphere 83.4
1938 Female, age 85, left hemisphere 58.6
2613 Female, age 94, left hemisphere 57.3
1787 Male, age 76, left hemisphere 51.7
2686 Male, age 75, right hemisphere 45.1
Hippocampus, CA1
nTPM: 50.1
2527 Male, age 74, both hemispheres 63.1
2082 Female, age 91, right hemisphere 60.8
1873 Female, age 85, both hemispheres 60.2
2749 Male, age 80, left hemisphere 40.0
2045 Male, age 76, both hemispheres 26.3
Hippocampus, CA2
nTPM: 69.4
1963 Male, age 80, left hemisphere 86.7
2249 Male, age 74, both hemispheres 82.9
2113 Female, age 91, right hemisphere 71.6
2437 Female, age 94, left hemisphere 70.9
1940 Female, age 85, left hemisphere 62.2
1892 Male, age 76, both hemispheres 42.3
Hippocampus, CA3
nTPM: 52.5
1891 Female, age 85, both hemispheres 114.9
1867 Male, age 76, both hemispheres 62.4
2436 Male, age 74, both hemispheres 52.2
2620 Female, age 94, left hemisphere 35.7
2137 Male, age 80, left hemisphere 32.7
2861 Female, age 67, both hemispheres 17.1
Parahippocampal cortex
nTPM: 59.1
2018 Male, age 76, both hemispheres 82.4
2692 Male, age 74, both hemispheres 81.3
1990 Female, age 91, right hemisphere 81.1
2532 Female, age 72, left hemisphere 78.7
1850 Male, age 80, both hemispheres 61.4
2245 Female, age 91, both hemispheres 53.9
1933 Female, age 85, both hemispheres 53.1
2693 Female, age 94, both hemispheres 44.6
2250 Female, age 67, right hemisphere 34.9
2622 Female, age 67, right hemisphere 19.5
Perirhinal gyrus
nTPM: 37.3
2521 Female, age 94, right hemisphere 44.6
2848 Male, age 76, right hemisphere 41.9
1794 Male, age 80, right hemisphere 35.4
1847 Female, age 91, left hemisphere 35.0
1841 Female, age 85, right hemisphere 29.7
Subiculum
nTPM: 101.1
2042 Male, age 76, both hemispheres 155.8
1901 Male, age 80, both hemispheres 123.6
1977 Female, age 85, both hemispheres 100.5
2438 Female, age 94, left hemisphere 81.0
2619 Male, age 74, both hemispheres 74.8
2729 Female, age 91, right hemisphere 71.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 65.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 65.4
Samples: 197

Max nTPM: 220.3
Min nTPM: 5.0
Std nTPM: 43.4
Median nTPM: 53.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 220.3
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 209.9
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 193.3
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 192.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 184.5
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 179.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 176.1
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 158.4
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 153.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 149.2
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 145.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 225.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 225.2
FF:10153-102I9 76 years, female 230.8
FF:10169-103B7 60 years, female 219.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 32.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 32.0
Samples: 4

Max nTPM: 50.2
Min nTPM: 7.8
Sample A Female 50.2
Sample B Female 23.8
Sample C Male 46.1
Sample D Male 7.8
Entorhinal cortex
nTPM: 8.6
Samples: 4

Max nTPM: 13.4
Min nTPM: 5.9
Sample A Female 6.9
Sample B Female 13.4
Sample C Male 5.9
Sample D Male 8.3
Subiculum
nTPM: 10.4
Samples: 4

Max nTPM: 14.6
Min nTPM: 8.3
Sample A Female 9.6
Sample B Female 14.6
Sample C Male 8.3
Sample D Male 9.0
Ventral hippocampus
nTPM: 18.1
Samples: 4

Max nTPM: 26.7
Min nTPM: 10.4
Sample A Female 26.7
Sample B Female 10.4
Sample C Male 13.6
Sample D Male 21.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.7
Samples: 4

Max nTPM: 7.8
Min nTPM: 5.3
Sample A Male 7.8
Sample B Male 6.3
Sample C Female 7.5
Sample D Female 5.3
Hippocampal formation
nTPM: 9.1
Samples: 4

Max nTPM: 10.1
Min nTPM: 7.8
Sample A Male 7.8
Sample B Male 9.9
Sample C Female 10.1
Sample D Female 8.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
583855 Antisense, RP_040831_01_B06, Mouse strain C57BL/6J (56 days, male) 0.5

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