HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:188.3 nTPM
HPA:188.3 nTPM
GTEx:267.5 nTPM
FANTOM5:201.6 Scaled Tags Per Million
Pig:167.0 nTPM
Mouse:234.6 nTPM
Allen mouse:2.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005665Antibody HPA036534
Glial cells Not detectedMedium
Neuronal cells LowNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 188.3
Sample id Sample description nTPM
Hippocampus
nTPM: 172.5
2529 Female, age 94, left hemisphere 193.0
2621 Female, age 67, right hemisphere 176.0
1911 Female, age 85, right hemisphere 174.8
1898 Male, age 80, left hemisphere 171.2
1855 Male, age 76, left hemisphere 165.6
2148 Female, age 91, left hemisphere 154.2
Dentate gyrus
nTPM: 171.9
2530 Female, age 94, left hemisphere 220.3
2010 Male, age 76, both hemispheres 181.3
2246 Female, age 85, both hemispheres 165.7
2528 Male, age 74, both hemispheres 161.0
2531 Female, age 67, both hemispheres 157.4
1927 Female, age 91, both hemispheres 145.8
Entorhinal gyrus
nTPM: 185.8
2686 Male, age 75, right hemisphere 194.2
2764 Male, age 80, right hemisphere 190.9
2117 Female, age 91, right hemisphere 189.8
1787 Male, age 76, left hemisphere 186.6
1938 Female, age 85, left hemisphere 178.1
2613 Female, age 94, left hemisphere 174.9
Hippocampus, CA1
nTPM: 160.3
2527 Male, age 74, both hemispheres 167.8
1873 Female, age 85, both hemispheres 166.9
2749 Male, age 80, left hemisphere 166.1
2082 Female, age 91, right hemisphere 159.2
2045 Male, age 76, both hemispheres 141.5
Hippocampus, CA2
nTPM: 175.8
1963 Male, age 80, left hemisphere 190.4
2437 Female, age 94, left hemisphere 183.0
1892 Male, age 76, both hemispheres 173.5
1940 Female, age 85, left hemisphere 172.0
2249 Male, age 74, both hemispheres 171.8
2113 Female, age 91, right hemisphere 164.3
Hippocampus, CA3
nTPM: 153.6
1891 Female, age 85, both hemispheres 187.8
1867 Male, age 76, both hemispheres 170.5
2137 Male, age 80, left hemisphere 145.6
2436 Male, age 74, both hemispheres 144.0
2861 Female, age 67, both hemispheres 138.0
2620 Female, age 94, left hemisphere 135.6
Parahippocampal cortex
nTPM: 168.4
2532 Female, age 72, left hemisphere 183.9
2692 Male, age 74, both hemispheres 180.0
2018 Male, age 76, both hemispheres 178.6
1850 Male, age 80, both hemispheres 172.5
1990 Female, age 91, right hemisphere 171.9
1933 Female, age 85, both hemispheres 168.4
2245 Female, age 91, both hemispheres 165.8
2693 Female, age 94, both hemispheres 158.0
2250 Female, age 67, right hemisphere 152.8
2622 Female, age 67, right hemisphere 152.4
Perirhinal gyrus
nTPM: 165.6
2848 Male, age 76, right hemisphere 181.4
1841 Female, age 85, right hemisphere 163.2
1794 Male, age 80, right hemisphere 163.0
1847 Female, age 91, left hemisphere 160.2
2521 Female, age 94, right hemisphere 160.1
Subiculum
nTPM: 188.3
2042 Male, age 76, both hemispheres 211.3
1901 Male, age 80, both hemispheres 199.1
2438 Female, age 94, left hemisphere 195.2
1977 Female, age 85, both hemispheres 192.1
2619 Male, age 74, both hemispheres 175.0
2729 Female, age 91, right hemisphere 157.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 267.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 267.5
Samples: 197

Max nTPM: 792.2
Min nTPM: 47.7
Std nTPM: 121.2
Median nTPM: 244.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 792.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 706.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 702.3
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 613.8
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 606.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 576.5
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 543.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 536.0
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 522.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 502.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 501.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 201.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 201.6
FF:10153-102I9 76 years, female 249.4
FF:10169-103B7 60 years, female 153.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 167.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 167.0
Samples: 4

Max nTPM: 224.3
Min nTPM: 108.7
Sample A Female 224.3
Sample B Female 142.4
Sample C Male 192.5
Sample D Male 108.7
Entorhinal cortex
nTPM: 119.5
Samples: 4

Max nTPM: 133.2
Min nTPM: 110.3
Sample A Female 120.0
Sample B Female 133.2
Sample C Male 114.5
Sample D Male 110.3
Subiculum
nTPM: 110.9
Samples: 4

Max nTPM: 135.4
Min nTPM: 94.6
Sample A Female 135.4
Sample B Female 113.4
Sample C Male 100.3
Sample D Male 94.6
Ventral hippocampus
nTPM: 135.7
Samples: 4

Max nTPM: 150.7
Min nTPM: 102.9
Sample A Female 140.3
Sample B Female 102.9
Sample C Male 148.9
Sample D Male 150.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 234.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 234.6
Samples: 4

Max nTPM: 266.8
Min nTPM: 210.6
Sample A Male 243.9
Sample B Male 266.8
Sample C Female 210.6
Sample D Female 217.0
Hippocampal formation
nTPM: 201.6
Samples: 4

Max nTPM: 205.2
Min nTPM: 196.7
Sample A Male 205.2
Sample B Male 203.6
Sample C Female 201.0
Sample D Female 196.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.8
69549619 Antisense, RP_050222_01_F03, Mouse strain C57BL/6J (56 days, male) 2.8

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