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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:291.2 nTPM
HPA:291.2 nTPM
FANTOM5:129.3 Scaled Tags Per Million
Pig:127.7 nTPM

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max nTPM 291.2
Sample id Sample description nTPM
Area postrema
nTPM: 263.8
2799 Male, age 61, both hemispheres 264.6
2054 Male, age 76, both hemispheres 264.1
2306 Male, age 80, both hemispheres 262.5
Cuneate nuclei
nTPM: 276.1
2376 Male, age 61, both hemispheres 286.6
2131 Male, age 76, both hemispheres 272.5
2381 Male, age 80, both hemispheres 269.1
Dorsal medullary reticular nucleus
nTPM: 283.3
2040 Female, age 85, both hemispheres 312.6
2373 Male, age 61, both hemispheres 275.3
2088 Male, age 76, both hemispheres 262.2
Dorsal motor vagal complex
nTPM: 268.7
2000 Male, age 74, unknown 287.8
2133 Female, age 91, both hemispheres 284.7
2844 Male, age 55, unknown 278.3
2797 Male, age 61, both hemispheres 265.8
2643 Male, age 74, both hemispheres 261.0
2813 Female, age 72, unknown 260.4
2185 Male, age 76, both hemispheres 258.3
2807 Female, age 85, both hemispheres 253.3
Gigantocellular reticular nuclei, medullary
nTPM: 278.7
1876 Female, age 85, both hemispheres 305.9
2314 Male, age 61, both hemispheres 280.7
2022 Male, age 76, right hemisphere 279.1
2387 Female, age 91, both hemispheres 272.2
2462 Male, age 74, both hemispheres 267.5
2310 Male, age 80, both hemispheres 267.2
Gigantocellular reticular nuclei, pars
nTPM: 268.7
2084 Female, age 85, both hemispheres 286.7
2168 Male, age 76, both hemispheres 273.9
2336 Male, age 61, both hemispheres 268.2
2706 Male, age 80, both hemispheres 259.8
2330 Male, age 80, both hemispheres 254.9
Inferior olive
nTPM: 279.9
2563 Male, age 74, both hemispheres 307.0
2085 Female, age 85, both hemispheres 281.7
2178 Male, age 61, both hemispheres 281.7
2379 Male, age 80, both hemispheres 268.4
2628 Female, age 91, both hemispheres 260.9
Lateral medullary reticular nucleus
nTPM: 285.0
2044 Male, age 76, both hemispheres 308.8
2305 Male, age 74, both hemispheres 296.1
2852 Male, age 80, both hemispheres 281.6
2190 Female, age 85, both hemispheres 277.9
2804 Female, age 91, both hemispheres 277.0
2374 Male, age 61, both hemispheres 268.9
Medial vestibular nucleus
nTPM: 287.3
2801 Male, age 74, both hemispheres 295.3
2743 Female, age 85, both hemispheres 291.7
2093 Male, age 80, both hemispheres 290.0
2803 Female, age 91, both hemispheres 287.0
2134 Male, age 76, both hemispheres 280.8
2624 Male, age 61, both hemispheres 279.0
Motor hypoglossal nucleus
nTPM: 269.9
2125 Female, age 91, both hemispheres 286.3
2132 Female, age 85, both hemispheres 284.5
2182 Male, age 80, both hemispheres 263.4
2277 Male, age 76, both hemispheres 260.4
2461 Male, age 61, both hemispheres 254.7
Nucleus ambiguus
nTPM: 269.5
2071 Male, age 76, both hemispheres 274.3
2096 Female, age 85, both hemispheres 264.6
Nucleus cuneatus
nTPM: 267.9
2564 Male, age 74, both hemispheres 285.3
2380 Male, age 80, both hemispheres 270.2
2562 Male, age 61, both hemispheres 267.4
2100 Male, age 76, both hemispheres 263.8
2808 Female, age 85, both hemispheres 262.4
2805 Female, age 91, both hemispheres 258.1
Nucleus gracilis
nTPM: 266.5
2627 Male, age 74, both hemispheres 282.6
2382 Male, age 80, both hemispheres 265.1
2299 Female, age 85, both hemispheres 251.9
Nucleus raphe magnus
nTPM: 276.7
2160 Male, age 61, both hemispheres 300.9
2051 Male, age 76, both hemispheres 281.1
2455 Male, age 74, both hemispheres 280.6
2172 Female, age 85, both hemispheres 272.5
2328 Male, age 80, both hemispheres 265.8
2459 Female, age 91, both hemispheres 259.1
Nucleus raphe obscurus
nTPM: 283.7
2800 Male, age 61, midline 292.3
2845 Female, age 85, midline 292.1
2142 Male, age 76, midline 266.7
Nucleus raphe pallidus
nTPM: 285.0
1924 Male, age 61, midline 312.0
2183 Male, age 80, midline 282.8
2145 Male, age 76, midline 260.0
Nucleus tractus solitarii
nTPM: 271.2
2144 Female, age 91, right hemisphere 302.7
2656 Male, age 76, both hemispheres 270.5
2191 Female, age 85, both hemispheres 258.0
2307 Male, age 80, both hemispheres 253.5
Parvicellular reticular nuclei
nTPM: 277.9
2119 Male, age 80, both hemispheres 285.1
2095 Male, age 76, both hemispheres 284.3
2558 Male, age 74, both hemispheres 264.3
Parvicellular reticular nuclei, medullary
nTPM: 279.9
2189 Female, age 91, both hemispheres 285.0
2091 Female, age 85, both hemispheres 283.6
2181 Male, age 80, left hemisphere 271.1
Peritrigeminal nucleus
nTPM: 285.8
2136 Male, age 76, both hemispheres 290.0
2067 Female, age 85, both hemispheres 286.0
2179 Male, age 61, both hemispheres 281.4
Prepositus hypoglossal nucleus
nTPM: 288.6
2855 Female, age 85, right hemisphere 302.2
2086 Male, age 80, both hemispheres 274.9
Spinal trigeminal nucleus, caudal
nTPM: 273.4
2390 Female, age 91, both hemispheres 288.0
2447 Male, age 76, both hemispheres 277.9
2642 Male, age 74, both hemispheres 269.6
2308 Male, age 80, both hemispheres 265.9
2312 Male, age 61, both hemispheres 265.6
Spinal trigeminal nucleus, interpolar
nTPM: 291.2
2066 Male, age 76, right hemisphere 309.9
2033 Male, age 80, both hemispheres 298.5
2625 Male, age 61, both hemispheres 289.9
2386 Female, age 85, both hemispheres 286.3
2389 Female, age 91, both hemispheres 271.4
Spinal vestibular nucleus
nTPM: 286.8
2806 Female, age 85, both hemispheres 295.8
2780 Male, age 80, both hemispheres 293.9
2384 Male, age 74, both hemispheres 287.1
2186 Female, age 91, both hemispheres 284.2
2748 Male, age 76, both hemispheres 281.9
2796 Male, age 61, both hemispheres 278.1
Ventral medullary reticular nucleus
nTPM: 278.3
2372 Male, age 61, both hemispheres 282.9
2060 Male, age 76, both hemispheres 273.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 282.8
1986 Male, age 76, both hemispheres 297.2
2741 Female, age 85, both hemispheres 289.2
2180 Male, age 61, both hemispheres 281.5
2302 Female, age 91, both hemispheres 275.0
2118 Male, age 80, both hemispheres 271.2

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 129.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 129.3
FF:10174-103C3 60 years, female 217.0
FF:10155-103A2 76 years, female 101.1
FF:10038-101F2 18-64 years, mixed 69.9

MEDULLA OBLONGATA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 127.7
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 127.7
Samples: 4

Max nTPM: 136.2
Min nTPM: 114.4
Sample A Female 114.4
Sample B Female 128.9
Sample C Male 131.2
Sample D Male 136.2

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by the Knut & Alice Wallenberg Foundation.