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A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
Protein expressioni
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 199.5
Min nTPM: 74.7
Std nTPM: 24.3
Median nTPM:
490_1
67 years, female
199.5
491_1
89 years, female
192.6
43_1
64 years, female
160.6
162_1
79 years, female
159.6
42_1
85 years, male
155.2
89_1
63 years, male
154.8
495_1
57 years, female
149.6
149_1
88 years, male
149.2
35_1
74 years, female
147.3
117_1
61 years, male
146.7
119_1
70 years, female
146.5
415_1
77 years, female
144.8
32_1
67 years, male
144.1
81_1
67 years, male
144.0
139_1
64 years, female
141.9
307_1
66 years, female
141.9
142_1
61 years, female
141.3
145_1
84 years, male
141.2
137_1
83 years, male
138.5
466_1
57 years, female
137.5
347_1
72 years, male
136.6
99_1
64 years, male
134.3
375_1
74 years, female
134.0
41_1
94 years, female
133.6
311_1
78 years, male
133.0
2_1
77 years, female
130.1
413_1
59 years, female
130.1
126_1
63 years, male
127.0
17_1
71 years, male
126.8
173_1
67 years, male
126.4
501_1
88 years, male
125.4
237_1
82 years, male
124.3
217_1
76 years, male
123.9
6_1
73 years, female
123.7
120_1
70 years, female
122.1
348_1
84 years, male
122.0
315_1
62 years, female
121.8
324_1
76 years, male
119.7
229_1
69 years, female
118.2
322_1
76 years, male
117.7
153_1
70 years, female
117.6
414_1
84 years, female
117.6
218_1
71 years, female
117.5
447_1
81 years, male
117.3
109_1
81 years, female
117.1
379_1
60 years, male
117.0
314_1
67 years, male
116.7
308_1
70 years, female
115.3
4_1
88 years, female
115.2
18_1
88 years, male
115.0
266_1
85 years, male
114.5
499_1
55 years, female
111.5
313_1
79 years, female
111.0
317_1
60 years, male
110.9
468_1
89 years, male
110.6
265_1
87 years, male
109.2
288_1
66 years, female
108.5
480_1
63 years, male
108.2
405_1
91 years, male
107.7
115_1
83 years, male
107.4
386_1
76 years, male
107.0
9_1
66 years, female
106.6
518_1
75 years, female
106.0
404_1
82 years, female
105.3
396_1
62 years, male
102.8
316_1
62 years, male
102.4
352_1
62 years, male
102.4
246_1
77 years, male
101.8
355_1
70 years, female
101.6
384_1
83 years, male
100.7
526_1
61 years, male
100.3
335_1
73 years, female
100.2
389_1
86 years, female
98.9
254_1
77 years, female
98.7
318_1
68 years, male
97.7
251_1
78 years, male
97.2
291_1
76 years, male
96.9
172_1
72 years, female
95.5
321_1
62 years, female
95.2
189_1
76 years, male
95.0
286_1
68 years, female
93.8
293_1
68 years, female
93.8
295_1
61 years, female
91.7
292_1
71 years, male
91.3
264_1
73 years, female
91.1
503_1
68 years, male
90.0
350_1
84 years, female
89.8
354_1
81 years, female
89.3
243_1
75 years, male
89.2
425_1
59 years, female
88.9
506_1
65 years, male
86.4
353_1
82 years, female
86.1
320_1
89 years, female
85.5
517_1
88 years, male
85.0
177_1
74 years, male
84.7
452_1
88 years, female
84.7
351_1
91 years, male
84.5
406_1
79 years, male
83.5
349_1
83 years, male
83.2
394_1
75 years, female
82.4
377_1
82 years, female
81.9
319_1
81 years, male
79.3
163_1
78 years, male
77.7
356_1
87 years, female
75.7
376_1
75 years, female
74.7
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
