HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:75.9 nTPM
HPA:75.9 nTPM
GTEx:63.3 nTPM
FANTOM5:185.5 Scaled Tags Per Million
Pig:27.8 nTPM
Mouse:89.4 nTPM
Allen mouse:4.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019338
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 75.9
Sample id Sample description nTPM
Hippocampus
nTPM: 66.1
1898 Male, age 80, left hemisphere 73.6
2621 Female, age 67, right hemisphere 73.5
2148 Female, age 91, left hemisphere 65.7
2529 Female, age 94, left hemisphere 64.8
1855 Male, age 76, left hemisphere 63.7
1911 Female, age 85, right hemisphere 55.3
Dentate gyrus
nTPM: 66.7
2530 Female, age 94, left hemisphere 90.0
2010 Male, age 76, both hemispheres 74.4
1927 Female, age 91, both hemispheres 65.3
2531 Female, age 67, both hemispheres 64.2
2246 Female, age 85, both hemispheres 55.7
2528 Male, age 74, both hemispheres 50.5
Entorhinal gyrus
nTPM: 75.9
2764 Male, age 80, right hemisphere 85.7
2613 Female, age 94, left hemisphere 81.8
2686 Male, age 75, right hemisphere 78.4
1787 Male, age 76, left hemisphere 72.3
1938 Female, age 85, left hemisphere 69.0
2117 Female, age 91, right hemisphere 68.0
Hippocampus, CA1
nTPM: 62.3
2749 Male, age 80, left hemisphere 78.2
2045 Male, age 76, both hemispheres 64.9
1873 Female, age 85, both hemispheres 63.5
2527 Male, age 74, both hemispheres 56.1
2082 Female, age 91, right hemisphere 48.9
Hippocampus, CA2
nTPM: 65.0
1963 Male, age 80, left hemisphere 75.5
2437 Female, age 94, left hemisphere 71.1
1940 Female, age 85, left hemisphere 68.6
1892 Male, age 76, both hemispheres 68.1
2249 Male, age 74, both hemispheres 57.6
2113 Female, age 91, right hemisphere 49.1
Hippocampus, CA3
nTPM: 59.7
1867 Male, age 76, both hemispheres 70.6
2620 Female, age 94, left hemisphere 67.7
2861 Female, age 67, both hemispheres 67.6
1891 Female, age 85, both hemispheres 56.3
2137 Male, age 80, left hemisphere 55.7
2436 Male, age 74, both hemispheres 40.3
Parahippocampal cortex
nTPM: 67.1
2532 Female, age 72, left hemisphere 80.2
2622 Female, age 67, right hemisphere 75.8
1990 Female, age 91, right hemisphere 71.2
1850 Male, age 80, both hemispheres 71.1
1933 Female, age 85, both hemispheres 69.1
2245 Female, age 91, both hemispheres 68.6
2692 Male, age 74, both hemispheres 65.1
2018 Male, age 76, both hemispheres 64.6
2250 Female, age 67, right hemisphere 53.4
2693 Female, age 94, both hemispheres 52.2
Perirhinal gyrus
nTPM: 68.6
1794 Male, age 80, right hemisphere 79.1
1847 Female, age 91, left hemisphere 78.4
2848 Male, age 76, right hemisphere 64.4
1841 Female, age 85, right hemisphere 63.8
2521 Female, age 94, right hemisphere 57.3
Subiculum
nTPM: 66.2
2438 Female, age 94, left hemisphere 82.3
1901 Male, age 80, both hemispheres 68.3
1977 Female, age 85, both hemispheres 66.9
2042 Male, age 76, both hemispheres 63.0
2619 Male, age 74, both hemispheres 61.5
2729 Female, age 91, right hemisphere 54.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 63.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 63.3
Samples: 197

Max nTPM: 119.8
Min nTPM: 25.1
Std nTPM: 14.7
Median nTPM: 62.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 119.8
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 113.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 112.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 101.1
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 99.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 98.9
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 96.2
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 93.9
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 93.0
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 90.9
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 88.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 185.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 185.5
FF:10153-102I9 76 years, female 195.2
FF:10169-103B7 60 years, female 175.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 24.8
Samples: 4

Max nTPM: 28.0
Min nTPM: 20.6
Sample A Female 28.0
Sample B Female 25.3
Sample C Male 25.1
Sample D Male 20.6
Entorhinal cortex
nTPM: 27.8
Samples: 4

Max nTPM: 29.3
Min nTPM: 26.7
Sample A Female 28.1
Sample B Female 27.1
Sample C Male 29.3
Sample D Male 26.7
Subiculum
nTPM: 24.3
Samples: 4

Max nTPM: 29.7
Min nTPM: 21.7
Sample A Female 29.7
Sample B Female 22.1
Sample C Male 23.6
Sample D Male 21.7
Ventral hippocampus
nTPM: 24.7
Samples: 4

Max nTPM: 30.2
Min nTPM: 19.0
Sample A Female 24.5
Sample B Female 19.0
Sample C Male 30.2
Sample D Male 25.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 89.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 89.4
Samples: 4

Max nTPM: 94.7
Min nTPM: 83.1
Sample A Male 90.5
Sample B Male 89.2
Sample C Female 83.1
Sample D Female 94.7
Hippocampal formation
nTPM: 81.7
Samples: 4

Max nTPM: 83.8
Min nTPM: 78.9
Sample A Male 78.9
Sample B Male 83.8
Sample C Female 83.7
Sample D Female 80.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.2
71211746 Antisense, RP_050816_02_D01, Mouse strain C57BL/6J (56 days, male) 4.2

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