HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:69.4 nTPM
HPA:69.4 nTPM
GTEx:64.8 nTPM
FANTOM5:128.0 Scaled Tags Per Million
Pig:33.9 nTPM
Mouse:31.3 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045599
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 69.4
Sample id Sample description nTPM
Hippocampus
nTPM: 62.0
2529 Female, age 94, left hemisphere 68.6
1911 Female, age 85, right hemisphere 63.1
1898 Male, age 80, left hemisphere 62.4
1855 Male, age 76, left hemisphere 60.3
2621 Female, age 67, right hemisphere 59.7
2148 Female, age 91, left hemisphere 57.8
Dentate gyrus
nTPM: 60.0
2530 Female, age 94, left hemisphere 70.7
2010 Male, age 76, both hemispheres 66.3
2528 Male, age 74, both hemispheres 57.0
1927 Female, age 91, both hemispheres 56.4
2246 Female, age 85, both hemispheres 56.0
2531 Female, age 67, both hemispheres 53.8
Entorhinal gyrus
nTPM: 60.7
2117 Female, age 91, right hemisphere 76.9
2686 Male, age 75, right hemisphere 60.5
2764 Male, age 80, right hemisphere 60.1
1938 Female, age 85, left hemisphere 58.2
2613 Female, age 94, left hemisphere 54.9
1787 Male, age 76, left hemisphere 53.7
Hippocampus, CA1
nTPM: 58.5
2527 Male, age 74, both hemispheres 64.9
1873 Female, age 85, both hemispheres 60.4
2082 Female, age 91, right hemisphere 57.1
2045 Male, age 76, both hemispheres 55.6
2749 Male, age 80, left hemisphere 54.4
Hippocampus, CA2
nTPM: 62.2
2437 Female, age 94, left hemisphere 65.9
2249 Male, age 74, both hemispheres 65.1
1963 Male, age 80, left hemisphere 63.7
2113 Female, age 91, right hemisphere 61.0
1940 Female, age 85, left hemisphere 59.6
1892 Male, age 76, both hemispheres 57.8
Hippocampus, CA3
nTPM: 56.2
1891 Female, age 85, both hemispheres 72.8
1867 Male, age 76, both hemispheres 61.1
2436 Male, age 74, both hemispheres 58.7
2137 Male, age 80, left hemisphere 51.2
2861 Female, age 67, both hemispheres 47.6
2620 Female, age 94, left hemisphere 45.9
Parahippocampal cortex
nTPM: 58.9
1990 Female, age 91, right hemisphere 64.9
2692 Male, age 74, both hemispheres 64.5
1850 Male, age 80, both hemispheres 64.4
2018 Male, age 76, both hemispheres 62.7
2532 Female, age 72, left hemisphere 60.0
1933 Female, age 85, both hemispheres 58.5
2245 Female, age 91, both hemispheres 58.0
2693 Female, age 94, both hemispheres 54.1
2250 Female, age 67, right hemisphere 53.0
2622 Female, age 67, right hemisphere 48.9
Perirhinal gyrus
nTPM: 55.1
2521 Female, age 94, right hemisphere 55.9
2848 Male, age 76, right hemisphere 55.6
1847 Female, age 91, left hemisphere 55.0
1841 Female, age 85, right hemisphere 54.8
1794 Male, age 80, right hemisphere 54.1
Subiculum
nTPM: 69.4
2042 Male, age 76, both hemispheres 81.4
2438 Female, age 94, left hemisphere 77.4
1901 Male, age 80, both hemispheres 73.3
1977 Female, age 85, both hemispheres 66.8
2619 Male, age 74, both hemispheres 60.8
2729 Female, age 91, right hemisphere 56.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 64.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 64.8
Samples: 197

Max nTPM: 156.0
Min nTPM: 19.8
Std nTPM: 29.0
Median nTPM: 58.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 156.0
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 154.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 138.1
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 137.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 136.1
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 135.3
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 134.6
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 134.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 132.8
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 126.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 117.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 128.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 128.0
FF:10153-102I9 76 years, female 128.4
FF:10169-103B7 60 years, female 127.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 33.9
Samples: 4

Max nTPM: 42.1
Min nTPM: 22.1
Sample A Female 42.1
Sample B Female 29.7
Sample C Male 41.7
Sample D Male 22.1
Entorhinal cortex
nTPM: 28.2
Samples: 4

Max nTPM: 35.9
Min nTPM: 24.2
Sample A Female 26.5
Sample B Female 35.9
Sample C Male 26.3
Sample D Male 24.2
Subiculum
nTPM: 27.5
Samples: 4

Max nTPM: 36.1
Min nTPM: 23.4
Sample A Female 36.1
Sample B Female 26.6
Sample C Male 23.7
Sample D Male 23.4
Ventral hippocampus
nTPM: 25.9
Samples: 4

Max nTPM: 27.5
Min nTPM: 21.6
Sample A Female 27.3
Sample B Female 21.6
Sample C Male 27.5
Sample D Male 27.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 31.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.6
Samples: 4

Max nTPM: 31.7
Min nTPM: 24.6
Sample A Male 30.0
Sample B Male 31.7
Sample C Female 28.1
Sample D Female 24.6
Hippocampal formation
nTPM: 31.2
Samples: 4

Max nTPM: 32.4
Min nTPM: 29.3
Sample A Male 31.8
Sample B Male 31.4
Sample C Female 32.4
Sample D Female 29.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
74357607 Antisense, RP_060119_03_A09, Mouse strain C57BL/6J (56 days, male) 0.1

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