We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
CRYL1
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • CRYL1
BRAIN AMYGDALA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Amygdala
AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:69.5 nTPM
HPA:69.5 nTPM
GTEx:80.4 nTPM
FANTOM5:35.0 Scaled Tags Per Million
Pig:15.1 nTPM
Mouse:22.8 nTPM
Allen mouse:0.2 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 69.5
Sample id Sample description nTPM
Amygdala
nTPM: 69.5
2695 Female, age 67, right hemisphere 73.5
1987 Female, age 91, left hemisphere 71.7
2514 Male, age 75, right hemisphere 71.1
2814 Male, age 76, right hemisphere 66.9
2517 Female, age 94, left hemisphere 64.5
Basal amygdala
nTPM: 62.8
2609 Male, age 75, right hemisphere 74.6
2110 Male, age 80, left hemisphere 62.5
2243 Female, age 91, right hemisphere 62.2
2685 Female, age 94, left hemisphere 61.7
1955 Male, age 76, both hemispheres 61.0
2827 Female, age 67, right hemisphere 55.0
Central amygdala
nTPM: 65.7
2515 Male, age 75, right hemisphere 71.3
2701 Female, age 91, right hemisphere 66.8
2826 Female, age 94, left hemisphere 65.3
1905 Male, age 76, both hemispheres 63.8
2239 Male, age 80, left hemisphere 61.4
Corticomedial amygdala
nTPM: 62.6
2428 Male, age 75, right hemisphere 71.1
2829 Male, age 80, left hemisphere 63.9
2242 Female, age 91, right hemisphere 62.9
2429 Female, age 94, left hemisphere 62.3
2240 Male, age 76, both hemispheres 60.6
2535 Female, age 67, right hemisphere 54.9
Lateral amygdala
nTPM: 63.4
2516 Male, age 75, right hemisphere 69.1
2256 Male, age 80, left hemisphere 64.1
2255 Female, age 91, right hemisphere 64.0
1883 Male, age 76, both hemispheres 62.8
2534 Female, age 94, left hemisphere 62.8
2830 Female, age 67, right hemisphere 57.6
Stria terminalis, bed nucleus
nTPM: 64.0
2486 Female, age 94, both hemispheres 65.7
2201 Male, age 74, unknown 65.2
1974 Female, age 91, both hemispheres 61.2

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 80.4
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 80.4
Samples: 152

Max nTPM: 181.5
Min nTPM: 15.7
Std nTPM: 24.8
Median nTPM: 76.7
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 181.5
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 166.3
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 158.8
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 134.5
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 133.8
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 132.2
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 129.2
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 127.2
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 127.2
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 127.0
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 119.6
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 114.2
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 113.4
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 113.2
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 110.4
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 107.0
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 106.9
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 106.3
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 106.2
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 106.1
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 104.3
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 103.1
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 102.1
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 101.9
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 101.7
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 101.6
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 101.4
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 99.4
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 98.1
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 98.0
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 96.6
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 96.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 96.4
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 95.8
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 95.4
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 95.2
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 93.8
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 92.4
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 92.0
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 91.8
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 91.4
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 91.0
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 89.3
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 89.2
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 89.1
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 87.5
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 87.4
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 87.4
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 87.2
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 86.7
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 86.6
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 86.6
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 86.4
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 85.8
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 85.8
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 85.3
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 84.7
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 83.8
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 83.1
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 82.5
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 82.2
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 82.1
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 82.0
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 81.5
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 81.0
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 80.2
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 79.7
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 79.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 79.3
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 78.6
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 78.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 78.1
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 77.8
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 77.4
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 77.1
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 77.0
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 76.3
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 76.3
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 76.2
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 76.1
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 75.7
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 75.3
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 74.6
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 74.5
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 73.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 73.8
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 73.8
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 73.1
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 72.6
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 72.0
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 71.2
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 71.1
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 71.0
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 70.6
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 70.4
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 70.2
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 70.0
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 70.0
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 69.8
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 69.6
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 69.6
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 69.4
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 68.9
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 68.5
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 68.5
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 68.2
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 68.0
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 67.6
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 67.3
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 66.6
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 66.4
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 66.1
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 66.0
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 65.8
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 65.7
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 65.5
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 64.5
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 64.3
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 64.0
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 62.2
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 62.2
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 61.7
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 61.6
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 61.6
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 61.3
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 61.1
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 61.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 60.5
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 60.3
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 60.2
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 59.1
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 58.6
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 58.5
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 58.3
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 55.5
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 55.4
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 55.3
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 55.1
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 55.1
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 54.3
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 52.3
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 49.3
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 49.2
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 49.2
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 46.3
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 43.1
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 40.6
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 40.6
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 40.4
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 34.1
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 20.1
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 15.7
Show allShow less

AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 35.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 35.0
FF:10151-102I7 76 years, female 35.0

AMYGDALA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 15.1
Pig sample Sample description nTPM
Amygdala
nTPM: 15.1
Samples: 4

Max nTPM: 20.2
Min nTPM: 12.8
Sample A Female 20.2
Sample B Female 12.8
Sample C Male 13.3
Sample D Male 14.1

AMYGDALA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 22.8
Mouse sample Sample description nTPM
Amygdala
nTPM: 22.8
Samples: 4

Max nTPM: 26.6
Min nTPM: 18.3
Sample A Male 23.5
Sample B Male 26.6
Sample C Female 18.3
Sample D Female 22.7

AMYGDALA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 0.2
77620762 Antisense, RP_070129_03_F09, Mouse strain C57BL/6J (56 days, male) 0.2

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.