HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:81.5 nTPM
HPA:81.5 nTPM
GTEx:112.5 nTPM
FANTOM5:193.4 Scaled Tags Per Million
Pig:102.6 nTPM
Mouse:496.0 nTPM
Allen mouse:12.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA060949
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 81.5
Sample id Sample description nTPM
Hippocampus
nTPM: 78.2
1898 Male, age 80, left hemisphere 91.7
2529 Female, age 94, left hemisphere 77.2
1855 Male, age 76, left hemisphere 76.3
2621 Female, age 67, right hemisphere 75.7
1911 Female, age 85, right hemisphere 74.4
2148 Female, age 91, left hemisphere 73.8
Dentate gyrus
nTPM: 77.2
1927 Female, age 91, both hemispheres 85.7
2010 Male, age 76, both hemispheres 83.5
2246 Female, age 85, both hemispheres 76.1
2530 Female, age 94, left hemisphere 75.6
2528 Male, age 74, both hemispheres 75.3
2531 Female, age 67, both hemispheres 67.3
Entorhinal gyrus
nTPM: 73.2
2117 Female, age 91, right hemisphere 77.8
1938 Female, age 85, left hemisphere 77.5
2764 Male, age 80, right hemisphere 73.5
2686 Male, age 75, right hemisphere 72.5
1787 Male, age 76, left hemisphere 71.2
2613 Female, age 94, left hemisphere 66.6
Hippocampus, CA1
nTPM: 79.2
2749 Male, age 80, left hemisphere 94.2
1873 Female, age 85, both hemispheres 78.8
2527 Male, age 74, both hemispheres 77.2
2045 Male, age 76, both hemispheres 74.0
2082 Female, age 91, right hemisphere 71.8
Hippocampus, CA2
nTPM: 80.1
1892 Male, age 76, both hemispheres 90.0
1963 Male, age 80, left hemisphere 85.8
2249 Male, age 74, both hemispheres 81.7
2113 Female, age 91, right hemisphere 75.3
1940 Female, age 85, left hemisphere 74.0
2437 Female, age 94, left hemisphere 73.8
Hippocampus, CA3
nTPM: 76.1
2137 Male, age 80, left hemisphere 85.2
2436 Male, age 74, both hemispheres 84.8
1867 Male, age 76, both hemispheres 84.1
1891 Female, age 85, both hemispheres 76.6
2861 Female, age 67, both hemispheres 63.3
2620 Female, age 94, left hemisphere 62.7
Parahippocampal cortex
nTPM: 75.2
1850 Male, age 80, both hemispheres 81.9
1990 Female, age 91, right hemisphere 80.0
2250 Female, age 67, right hemisphere 78.8
2018 Male, age 76, both hemispheres 78.0
1933 Female, age 85, both hemispheres 77.6
2245 Female, age 91, both hemispheres 77.1
2692 Male, age 74, both hemispheres 72.8
2532 Female, age 72, left hemisphere 70.3
2693 Female, age 94, both hemispheres 69.3
2622 Female, age 67, right hemisphere 66.0
Perirhinal gyrus
nTPM: 81.5
1847 Female, age 91, left hemisphere 90.8
1794 Male, age 80, right hemisphere 82.9
1841 Female, age 85, right hemisphere 82.3
2521 Female, age 94, right hemisphere 77.8
2848 Male, age 76, right hemisphere 73.8
Subiculum
nTPM: 77.3
2438 Female, age 94, left hemisphere 84.5
1901 Male, age 80, both hemispheres 79.7
1977 Female, age 85, both hemispheres 78.3
2729 Female, age 91, right hemisphere 75.6
2042 Male, age 76, both hemispheres 73.8
2619 Male, age 74, both hemispheres 72.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 112.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 112.5
Samples: 197

Max nTPM: 257.3
Min nTPM: 38.9
Std nTPM: 38.0
Median nTPM: 107.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 257.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 232.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 225.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 208.5
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 200.0
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 190.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 190.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 187.8
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 184.3
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 183.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 177.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 193.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 193.4
FF:10169-103B7 60 years, female 237.5
FF:10153-102I9 76 years, female 149.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 102.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 102.6
Samples: 4

Max nTPM: 122.7
Min nTPM: 82.4
Sample A Female 122.7
Sample B Female 95.7
Sample C Male 109.6
Sample D Male 82.4
Entorhinal cortex
nTPM: 101.4
Samples: 4

Max nTPM: 131.9
Min nTPM: 79.8
Sample A Female 101.7
Sample B Female 131.9
Sample C Male 92.1
Sample D Male 79.8
Subiculum
nTPM: 91.3
Samples: 4

Max nTPM: 118.6
Min nTPM: 81.0
Sample A Female 118.6
Sample B Female 84.6
Sample C Male 81.1
Sample D Male 81.0
Ventral hippocampus
nTPM: 94.2
Samples: 4

Max nTPM: 112.6
Min nTPM: 75.0
Sample A Female 112.6
Sample B Female 75.0
Sample C Male 97.6
Sample D Male 91.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 496.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 452.2
Samples: 4

Max nTPM: 488.2
Min nTPM: 419.8
Sample A Male 423.6
Sample B Male 477.3
Sample C Female 488.2
Sample D Female 419.8
Hippocampal formation
nTPM: 496.0
Samples: 4

Max nTPM: 570.0
Min nTPM: 461.0
Sample A Male 570.0
Sample B Male 461.0
Sample C Female 470.9
Sample D Female 482.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.7
73513447 Antisense, RP_051121_02_B08, Mouse strain C57BL/6J (56 days, male) 12.7

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