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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:94.7 nTPM
FANTOM5:140.5 Scaled Tags Per Million
Pig:95.4 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA041488Antibody CAB008656
Glial cells LowLow
Neuronal cells MediumHigh



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 94.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 94.7
Samples: 246

Max nTPM: 205.8
Min nTPM: 56.7
Std nTPM: 19.4
Median nTPM: 92.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 205.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 179.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 172.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 167.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 164.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 160.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 149.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 145.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 143.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 135.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 130.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 123.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 123.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 120.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 118.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 116.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 115.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 115.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 115.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 115.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 115.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 115.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 114.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 113.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 113.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 112.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 112.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 110.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 110.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 110.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 110.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 109.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 109.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 108.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 108.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 108.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 108.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 108.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 107.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 107.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 107.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 107.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 106.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 106.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 106.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 105.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 105.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 105.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 104.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 104.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 104.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 104.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 103.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 103.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 103.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 103.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 103.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 102.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 102.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 102.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 101.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 101.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 101.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 101.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 101.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 100.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 100.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 100.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 99.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 99.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 99.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 99.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 99.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 99.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 99.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 98.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 98.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 98.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 98.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 98.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 98.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 98.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 98.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 97.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 97.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 97.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 97.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 97.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 97.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 97.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 97.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 96.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 96.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 96.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 96.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 96.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 95.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 95.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 95.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 95.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 95.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 95.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 95.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 95.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 95.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 95.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 95.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 95.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 94.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 94.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 94.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 94.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 94.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 94.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 94.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 93.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 93.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 93.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 93.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 93.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 92.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 92.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 92.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 92.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 92.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 92.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 92.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 92.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 92.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 91.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 91.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 91.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 91.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 90.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 90.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 90.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 90.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 90.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 90.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 90.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 90.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 89.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 89.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 89.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 88.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 88.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 88.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 88.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 88.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 88.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 88.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 88.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 88.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 88.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 87.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 87.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 87.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 87.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 86.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 86.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 86.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 86.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 86.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 86.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 86.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 85.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 85.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 85.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 85.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 85.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 85.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 84.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 84.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 84.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 84.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 84.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 84.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 84.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 84.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 84.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 84.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 83.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 83.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 83.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 82.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 82.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 82.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 82.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 82.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 81.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 81.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 81.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 81.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 81.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 81.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 81.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 81.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 81.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 80.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 80.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 80.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 80.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 80.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 80.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 80.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 80.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 79.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 79.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 79.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 79.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 79.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 78.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 78.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 78.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 77.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 77.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 77.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 77.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 76.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 76.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 76.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 76.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 76.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 76.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 75.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 74.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 74.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 74.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 74.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 72.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 72.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 70.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 70.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 69.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 69.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 69.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 68.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 68.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 67.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 64.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 63.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 61.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 61.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 59.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 58.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 56.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 140.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 140.5
FF:10164-103B2 76 years, female 140.5

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 95.4
Pig sample Sample description nTPM
Caudate
nTPM: 95.4
Samples: 4

Max nTPM: 105.0
Min nTPM: 76.0
Sample A Female 102.5
Sample B Female 98.1
Sample C Male 105.0
Sample D Male 76.0

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