HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:136.1 nTPM
HPA:136.1 nTPM
GTEx:139.1 nTPM
FANTOM5:184.2 Scaled Tags Per Million
Pig:74.8 nTPM
Mouse:328.8 nTPM
Allen mouse:14.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA016464Antibody HPA061664
Glial cells Not detectedNot detected
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 136.1
Sample id Sample description nTPM
Hippocampus
nTPM: 118.5
1898 Male, age 80, left hemisphere 144.8
1855 Male, age 76, left hemisphere 118.5
2621 Female, age 67, right hemisphere 116.8
2148 Female, age 91, left hemisphere 111.4
2529 Female, age 94, left hemisphere 110.7
1911 Female, age 85, right hemisphere 108.6
Dentate gyrus
nTPM: 116.7
1927 Female, age 91, both hemispheres 133.2
2010 Male, age 76, both hemispheres 126.4
2528 Male, age 74, both hemispheres 116.4
2530 Female, age 94, left hemisphere 113.2
2246 Female, age 85, both hemispheres 112.0
2531 Female, age 67, both hemispheres 98.8
Entorhinal gyrus
nTPM: 119.4
1938 Female, age 85, left hemisphere 130.0
2764 Male, age 80, right hemisphere 127.0
1787 Male, age 76, left hemisphere 119.0
2613 Female, age 94, left hemisphere 117.3
2117 Female, age 91, right hemisphere 114.5
2686 Male, age 75, right hemisphere 108.7
Hippocampus, CA1
nTPM: 124.8
2749 Male, age 80, left hemisphere 155.2
1873 Female, age 85, both hemispheres 127.9
2527 Male, age 74, both hemispheres 119.9
2082 Female, age 91, right hemisphere 111.1
2045 Male, age 76, both hemispheres 110.0
Hippocampus, CA2
nTPM: 124.2
1892 Male, age 76, both hemispheres 143.9
1963 Male, age 80, left hemisphere 137.4
2249 Male, age 74, both hemispheres 127.9
1940 Female, age 85, left hemisphere 115.9
2113 Female, age 91, right hemisphere 112.0
2437 Female, age 94, left hemisphere 108.4
Hippocampus, CA3
nTPM: 119.9
2436 Male, age 74, both hemispheres 136.0
2137 Male, age 80, left hemisphere 135.1
1867 Male, age 76, both hemispheres 126.4
1891 Female, age 85, both hemispheres 116.1
2620 Female, age 94, left hemisphere 103.1
2861 Female, age 67, both hemispheres 102.4
Parahippocampal cortex
nTPM: 122.8
1850 Male, age 80, both hemispheres 145.1
1990 Female, age 91, right hemisphere 131.2
1933 Female, age 85, both hemispheres 128.5
2250 Female, age 67, right hemisphere 125.6
2693 Female, age 94, both hemispheres 120.4
2245 Female, age 91, both hemispheres 119.6
2018 Male, age 76, both hemispheres 115.4
2532 Female, age 72, left hemisphere 115.1
2692 Male, age 74, both hemispheres 113.8
2622 Female, age 67, right hemisphere 113.5
Perirhinal gyrus
nTPM: 136.1
1847 Female, age 91, left hemisphere 156.8
1794 Male, age 80, right hemisphere 138.7
1841 Female, age 85, right hemisphere 136.7
2521 Female, age 94, right hemisphere 126.1
2848 Male, age 76, right hemisphere 122.3
Subiculum
nTPM: 114.6
1901 Male, age 80, both hemispheres 124.3
1977 Female, age 85, both hemispheres 120.7
2619 Male, age 74, both hemispheres 114.9
2438 Female, age 94, left hemisphere 110.0
2729 Female, age 91, right hemisphere 109.7
2042 Male, age 76, both hemispheres 108.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 139.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 139.1
Samples: 197

Max nTPM: 395.2
Min nTPM: 50.8
Std nTPM: 52.3
Median nTPM: 128.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 395.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 324.3
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 252.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 248.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 246.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 241.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 238.7
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 237.8
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 236.0
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 232.5
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 230.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 184.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 184.2
FF:10169-103B7 60 years, female 258.4
FF:10153-102I9 76 years, female 109.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 74.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 74.8
Samples: 4

Max nTPM: 90.8
Min nTPM: 55.1
Sample A Female 90.8
Sample B Female 70.7
Sample C Male 82.5
Sample D Male 55.1
Entorhinal cortex
nTPM: 74.5
Samples: 4

Max nTPM: 92.7
Min nTPM: 60.4
Sample A Female 72.8
Sample B Female 92.7
Sample C Male 72.2
Sample D Male 60.4
Subiculum
nTPM: 71.1
Samples: 4

Max nTPM: 83.0
Min nTPM: 63.5
Sample A Female 83.0
Sample B Female 63.5
Sample C Male 66.6
Sample D Male 71.3
Ventral hippocampus
nTPM: 67.6
Samples: 4

Max nTPM: 81.6
Min nTPM: 54.6
Sample A Female 81.6
Sample B Female 54.6
Sample C Male 67.7
Sample D Male 66.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 328.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 309.0
Samples: 4

Max nTPM: 328.5
Min nTPM: 286.6
Sample A Male 307.9
Sample B Male 328.5
Sample C Female 313.1
Sample D Female 286.6
Hippocampal formation
nTPM: 328.8
Samples: 4

Max nTPM: 340.1
Min nTPM: 316.0
Sample A Male 339.5
Sample B Male 316.0
Sample C Female 340.1
Sample D Female 319.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.8
1207 Antisense, RP_Baylor_103242, Mouse strain C57BL/6J (56 days, male) 14.8
1208 Antisense, RP_Baylor_103242, Mouse strain C57BL/6J (56 days, male) 14.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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