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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA017203
Pigment epithelial cells
Not detected
Photoreceptor cells
Not detected
Limiting membrane
Not detected
Outer plexiform layer
Medium
Inner nuclear layer
Medium
Inner plexiform layer
Medium
Ganglion cells
Not detected
Nerve fiber layer
High
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 1150.1
Min nTPM: 92.1
Std nTPM: 210.0
Median nTPM: 0.0
452_1
88 years, female
1150.1
173_1
67 years, male
997.7
351_1
91 years, male
979.7
384_1
83 years, male
963.7
379_1
60 years, male
947.6
218_1
71 years, female
918.3
506_1
65 years, male
914.9
322_1
76 years, male
910.1
295_1
61 years, female
877.2
377_1
82 years, female
822.1
163_1
78 years, male
817.9
376_1
75 years, female
810.2
386_1
76 years, male
801.1
17_1
71 years, male
790.6
137_1
83 years, male
779.8
177_1
74 years, male
753.8
189_1
76 years, male
748.8
353_1
82 years, female
744.4
4_1
88 years, female
716.5
317_1
60 years, male
714.8
319_1
81 years, male
694.7
145_1
84 years, male
688.0
41_1
94 years, female
680.4
243_1
75 years, male
678.2
264_1
73 years, female
675.9
356_1
87 years, female
659.2
447_1
81 years, male
656.4
406_1
79 years, male
646.2
394_1
75 years, female
640.9
120_1
70 years, female
637.3
321_1
62 years, female
635.1
349_1
83 years, male
634.9
316_1
62 years, male
633.5
503_1
68 years, male
623.9
389_1
86 years, female
617.8
354_1
81 years, female
609.8
314_1
67 years, male
607.5
350_1
84 years, female
600.4
251_1
78 years, male
597.4
518_1
75 years, female
595.0
347_1
72 years, male
590.3
292_1
71 years, male
589.2
18_1
88 years, male
561.8
35_1
74 years, female
561.7
404_1
82 years, female
560.9
320_1
89 years, female
560.6
318_1
68 years, male
559.3
315_1
62 years, female
554.1
348_1
84 years, male
552.9
375_1
74 years, female
548.5
352_1
62 years, male
546.0
291_1
76 years, male
544.8
237_1
82 years, male
544.4
293_1
68 years, female
533.9
405_1
91 years, male
533.1
246_1
77 years, male
526.1
288_1
66 years, female
523.9
308_1
70 years, female
523.9
139_1
64 years, female
517.5
311_1
78 years, male
508.9
526_1
61 years, male
507.4
335_1
73 years, female
505.0
501_1
88 years, male
503.4
115_1
83 years, male
497.4
109_1
81 years, female
496.8
307_1
66 years, female
496.7
425_1
59 years, female
496.4
6_1
73 years, female
495.9
480_1
63 years, male
479.2
172_1
72 years, female
477.7
517_1
88 years, male
473.7
99_1
64 years, male
466.6
126_1
63 years, male
462.8
396_1
62 years, male
449.6
265_1
87 years, male
449.2
286_1
68 years, female
446.1
2_1
77 years, female
442.5
266_1
85 years, male
434.1
468_1
89 years, male
426.8
42_1
85 years, male
417.7
254_1
77 years, female
404.8
153_1
70 years, female
404.4
355_1
70 years, female
398.8
495_1
57 years, female
384.4
499_1
55 years, female
378.9
119_1
70 years, female
336.2
217_1
76 years, male
336.2
142_1
61 years, female
330.5
229_1
69 years, female
320.7
324_1
76 years, male
316.9
117_1
61 years, male
316.4
313_1
79 years, female
314.3
9_1
66 years, female
287.5
81_1
67 years, male
271.7
89_1
63 years, male
269.3
414_1
84 years, female
248.9
43_1
64 years, female
234.8
415_1
77 years, female
216.2
162_1
79 years, female
214.0
32_1
67 years, male
178.9
466_1
57 years, female
158.3
149_1
88 years, male
139.8
413_1
59 years, female
121.8
491_1
89 years, female
112.4
490_1
67 years, female
92.1
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.