HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:1090.3 nTPM
HPA:1090.3 nTPM
GTEx:1012.6 nTPM
FANTOM5:81.6 Scaled Tags Per Million
Pig:236.4 nTPM
Mouse:196.8 nTPM
Allen mouse:11.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA060776Antibody HPA063379
Glial cells Not detectedMedium
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 1090.3
Sample id Sample description nTPM
Hippocampus
nTPM: 1087.5
2529 Female, age 94, left hemisphere 1099.1
1898 Male, age 80, left hemisphere 1091.6
2621 Female, age 67, right hemisphere 1090.8
1855 Male, age 76, left hemisphere 1086.9
1911 Female, age 85, right hemisphere 1084.7
2148 Female, age 91, left hemisphere 1072.0
Dentate gyrus
nTPM: 1080.3
2530 Female, age 94, left hemisphere 1102.6
2010 Male, age 76, both hemispheres 1099.5
2531 Female, age 67, both hemispheres 1077.5
2246 Female, age 85, both hemispheres 1077.4
1927 Female, age 91, both hemispheres 1063.5
2528 Male, age 74, both hemispheres 1061.5
Entorhinal gyrus
nTPM: 1087.0
2686 Male, age 75, right hemisphere 1114.1
2117 Female, age 91, right hemisphere 1095.5
1787 Male, age 76, left hemisphere 1090.0
1938 Female, age 85, left hemisphere 1081.9
2764 Male, age 80, right hemisphere 1075.4
2613 Female, age 94, left hemisphere 1064.7
Hippocampus, CA1
nTPM: 1077.8
2045 Male, age 76, both hemispheres 1096.9
1873 Female, age 85, both hemispheres 1084.3
2527 Male, age 74, both hemispheres 1076.3
2082 Female, age 91, right hemisphere 1069.1
2749 Male, age 80, left hemisphere 1062.3
Hippocampus, CA2
nTPM: 1078.0
2437 Female, age 94, left hemisphere 1087.2
1892 Male, age 76, both hemispheres 1083.6
1940 Female, age 85, left hemisphere 1078.8
1963 Male, age 80, left hemisphere 1076.7
2113 Female, age 91, right hemisphere 1074.6
2249 Male, age 74, both hemispheres 1066.7
Hippocampus, CA3
nTPM: 1071.2
1867 Male, age 76, both hemispheres 1093.9
1891 Female, age 85, both hemispheres 1088.8
2861 Female, age 67, both hemispheres 1074.3
2137 Male, age 80, left hemisphere 1062.3
2436 Male, age 74, both hemispheres 1061.3
2620 Female, age 94, left hemisphere 1046.3
Parahippocampal cortex
nTPM: 1079.4
2018 Male, age 76, both hemispheres 1118.0
1850 Male, age 80, both hemispheres 1088.8
2692 Male, age 74, both hemispheres 1086.5
2532 Female, age 72, left hemisphere 1080.6
1933 Female, age 85, both hemispheres 1078.0
1990 Female, age 91, right hemisphere 1076.0
2245 Female, age 91, both hemispheres 1075.9
2250 Female, age 67, right hemisphere 1073.8
2622 Female, age 67, right hemisphere 1065.9
2693 Female, age 94, both hemispheres 1050.7
Perirhinal gyrus
nTPM: 1078.0
1847 Female, age 91, left hemisphere 1088.7
1841 Female, age 85, right hemisphere 1087.2
1794 Male, age 80, right hemisphere 1073.1
2848 Male, age 76, right hemisphere 1070.5
2521 Female, age 94, right hemisphere 1070.4
Subiculum
nTPM: 1090.3
2042 Male, age 76, both hemispheres 1112.3
2438 Female, age 94, left hemisphere 1101.4
1901 Male, age 80, both hemispheres 1092.1
1977 Female, age 85, both hemispheres 1088.6
2619 Male, age 74, both hemispheres 1083.4
2729 Female, age 91, right hemisphere 1063.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 1012.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1012.6
Samples: 197

Max nTPM: 2638.7
Min nTPM: 382.5
Std nTPM: 382.7
Median nTPM: 925.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 2638.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2343.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 2322.9
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 2116.3
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 2047.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1942.9
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 1875.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 1856.2
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 1786.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1768.9
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 1723.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 81.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 81.6
FF:10169-103B7 60 years, female 124.5
FF:10153-102I9 76 years, female 38.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 236.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 236.4
Samples: 4

Max nTPM: 312.5
Min nTPM: 157.1
Sample A Female 312.5
Sample B Female 215.2
Sample C Male 260.9
Sample D Male 157.1
Entorhinal cortex
nTPM: 177.1
Samples: 4

Max nTPM: 206.7
Min nTPM: 133.8
Sample A Female 162.5
Sample B Female 205.5
Sample C Male 206.7
Sample D Male 133.8
Subiculum
nTPM: 180.3
Samples: 4

Max nTPM: 247.9
Min nTPM: 142.1
Sample A Female 247.9
Sample B Female 179.8
Sample C Male 151.3
Sample D Male 142.1
Ventral hippocampus
nTPM: 205.4
Samples: 4

Max nTPM: 255.4
Min nTPM: 173.2
Sample A Female 191.9
Sample B Female 173.2
Sample C Male 255.4
Sample D Male 201.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 196.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 193.2
Samples: 4

Max nTPM: 201.0
Min nTPM: 185.5
Sample A Male 185.5
Sample B Male 199.2
Sample C Female 201.0
Sample D Female 187.1
Hippocampal formation
nTPM: 196.8
Samples: 4

Max nTPM: 218.2
Min nTPM: 184.3
Sample A Male 218.2
Sample B Male 184.3
Sample C Female 191.4
Sample D Female 193.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.8
69262228 Antisense, RP_050301_01_F08, Mouse strain C57BL/6J (56 days, male) 11.8

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