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RPL27A
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  • RPL27A
BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1148.6 nTPM
HPA:1148.6 nTPM
GTEx:1302.8 nTPM
FANTOM5:67.6 Scaled Tags Per Million
Pig:338.0 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 1148.6
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 1118.6
1981 Female, age 72, midline 1145.9
2048 Male, age 55, midline 1135.1
2565 Male, age 75, midline 1133.2
2194 Female, age 79, both hemispheres 1093.8
2816 Male, age 47, midline 1085.3
Cervical spinal cord, dorsal horn
nTPM: 1124.5
2069 Male, age 47, both hemispheres 1158.5
2173 Female, age 72, unknown 1155.4
2296 Male, age 66, both hemispheres 1142.2
1877 Male, age 55, unknown 1126.6
2721 Male, age 90, both hemispheres 1084.8
2297 Male, age 75, both hemispheres 1079.4
Cervical spinal cord, ventral horn
nTPM: 1148.6
2809 Male, age 90, both hemispheres 1201.9
2098 Female, age 72, unknown 1195.7
2480 Male, age 75, both hemispheres 1188.2
2068 Male, age 55, unknown 1118.4
2295 Male, age 66, both hemispheres 1116.3
2820 Female, age 79, both hemispheres 1071.0

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1302.8
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 1302.8
Samples: 159

Max nTPM: 2490.8
Min nTPM: 471.4
Std nTPM: 418.5
Median nTPM: 1220.9
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 2490.8
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 2482.7
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 2394.1
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 2369.2
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 2269.6
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 2259.5
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 2154.8
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 2110.6
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 2070.5
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 2016.7
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 2007.6
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 1974.5
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 1941.8
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 1904.9
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 1875.5
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 1860.8
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 1846.9
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 1836.0
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 1822.0
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 1808.0
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 1782.6
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 1768.4
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 1762.6
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 1747.1
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 1745.8
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 1744.3
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 1726.7
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 1722.6
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 1713.1
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 1706.5
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 1690.6
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 1673.0
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 1672.4
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 1669.7
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 1667.1
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 1648.7
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 1645.8
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 1620.1
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 1618.0
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 1614.1
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 1610.0
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 1564.5
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 1562.8
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 1526.5
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 1516.1
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 1495.5
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 1493.4
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 1467.8
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 1464.4
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 1443.1
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 1416.9
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 1407.2
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 1398.2
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 1395.7
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 1393.9
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 1390.5
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 1386.3
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 1378.6
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 1364.7
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 1357.8
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 1357.6
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 1345.8
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 1341.8
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 1335.5
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 1334.3
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 1326.5
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 1325.5
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 1323.0
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 1313.3
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 1308.4
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 1303.0
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 1298.1
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 1291.5
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 1284.3
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 1271.3
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 1249.1
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 1240.1
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 1228.5
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 1224.1
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 1220.9
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 1219.8
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 1211.6
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 1210.8
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 1208.6
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 1202.8
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 1202.2
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 1197.7
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 1196.4
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 1193.6
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 1192.9
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 1187.2
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 1187.0
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 1185.5
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 1184.7
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 1180.0
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 1177.3
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 1176.0
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 1165.8
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 1156.5
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 1134.0
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 1132.6
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 1106.4
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 1097.7
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 1076.4
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 1071.3
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 1061.6
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 1059.6
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 1050.1
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 1027.2
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 1023.8
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 1007.2
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 1001.8
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 997.5
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 997.2
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 994.9
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 994.8
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 993.6
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 987.3
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 977.6
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 973.3
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 970.6
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 970.1
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 968.5
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 962.6
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 961.2
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 960.8
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 952.1
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 931.8
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 928.6
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 926.6
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 924.4
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 917.4
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 912.0
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 908.4
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 906.7
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 902.2
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 894.8
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 893.8
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 886.1
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 885.3
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 860.4
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 856.9
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 846.3
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 838.1
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 827.1
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 814.4
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 803.0
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 779.1
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 750.8
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 737.7
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 734.2
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 722.2
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 694.1
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 687.6
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 676.4
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 601.7
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 576.4
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 502.9
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 471.4
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 67.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 67.6
FF:10181-103D1 60 years, female 89.5
FF:10159-103A6 76 years, female 45.6

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 338.0
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 338.1
Samples: 4

Max nTPM: 512.0
Min nTPM: 225.3
Sample A Female 231.7
Sample B Female 383.2
Sample C Male 512.0
Sample D Male 225.3
Ventral spinal cord
nTPM: 292.6
Samples: 4

Max nTPM: 338.2
Min nTPM: 222.8
Sample A Female 222.8
Sample B Female 338.2
Sample C Male 336.6
Sample D Male 272.9

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