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RPL27A
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  • RPL27A
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:938.1 nTPM
FANTOM5:60.5 Scaled Tags Per Million
Pig:175.9 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA060776Antibody HPA063379
Glial cells Not detectedLow
Neuronal cells MediumMedium




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 938.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 938.1
Samples: 246

Max nTPM: 2332.0
Min nTPM: 308.0
Std nTPM: 285.5
Median nTPM: 894.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 2332.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1859.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1845.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1830.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1733.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1618.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1616.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1584.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1567.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1523.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1499.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1498.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1475.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1450.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1425.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1375.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 1364.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1361.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1347.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1345.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1333.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1330.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1328.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1301.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 1298.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1297.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1296.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 1295.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1292.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1283.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1258.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1237.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 1230.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 1230.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1220.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1215.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1202.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1201.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 1200.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 1195.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1187.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1187.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 1180.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 1173.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 1173.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1168.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 1166.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 1160.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1157.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 1146.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 1140.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 1129.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 1126.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 1122.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 1116.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 1116.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 1107.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 1106.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 1103.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1092.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1089.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 1088.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 1086.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 1083.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 1077.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1072.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 1072.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 1069.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 1069.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 1063.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 1056.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 1045.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 1044.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 1043.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 1031.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 1030.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 1028.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 1028.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1028.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 1025.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 1016.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 1016.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 1007.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 1003.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 1001.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 997.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 993.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 992.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 986.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 982.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 981.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 979.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 969.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 965.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 965.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 957.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 957.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 957.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 954.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 954.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 947.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 942.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 941.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 941.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 938.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 938.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 937.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 933.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 933.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 927.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 922.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 920.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 918.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 918.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 916.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 912.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 910.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 906.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 904.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 897.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 896.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 895.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 895.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 892.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 891.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 888.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 887.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 887.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 886.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 883.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 880.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 879.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 877.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 872.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 870.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 869.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 869.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 867.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 864.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 861.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 860.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 858.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 852.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 847.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 847.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 846.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 844.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 842.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 842.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 842.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 840.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 833.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 832.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 831.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 829.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 827.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 825.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 823.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 818.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 816.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 812.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 810.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 808.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 804.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 794.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 782.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 781.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 779.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 773.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 772.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 754.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 752.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 747.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 746.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 737.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 736.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 733.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 731.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 728.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 728.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 727.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 725.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 725.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 724.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 723.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 723.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 719.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 718.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 717.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 708.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 708.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 707.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 702.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 702.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 699.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 698.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 696.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 696.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 694.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 693.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 689.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 689.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 688.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 688.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 684.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 673.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 671.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 669.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 669.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 669.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 663.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 659.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 653.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 653.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 652.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 646.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 646.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 645.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 643.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 638.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 632.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 629.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 628.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 624.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 613.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 601.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 594.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 585.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 584.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 572.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 568.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 566.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 565.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 560.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 558.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 553.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 552.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 543.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 536.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 534.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 529.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 529.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 513.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 511.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 506.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 308.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 60.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 60.5
FF:10164-103B2 76 years, female 60.5

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 175.9
Pig sample Sample description nTPM
Caudate
nTPM: 175.9
Samples: 4

Max nTPM: 192.9
Min nTPM: 151.6
Sample A Female 166.3
Sample B Female 192.9
Sample C Male 192.8
Sample D Male 151.6

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