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CIAO2B
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:132.0 nTPM
FANTOM5:75.3 Scaled Tags Per Million
Pig:52.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA041501Antibody HPA041736
Glial cells LowLow
Neuronal cells MediumHigh





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 132.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 132.0
Samples: 246

Max nTPM: 258.2
Min nTPM: 64.7
Std nTPM: 30.1
Median nTPM: 129.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 258.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 257.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 244.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 236.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 230.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 224.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 209.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 199.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 190.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 184.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 183.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 182.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 179.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 177.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 177.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 176.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 176.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 174.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 174.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 173.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 171.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 169.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 168.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 168.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 165.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 164.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 161.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 161.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 160.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 160.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 160.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 159.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 159.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 158.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 158.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 157.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 157.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 156.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 156.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 155.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 153.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 152.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 151.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 151.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 151.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 151.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 150.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 150.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 149.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 148.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 147.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 146.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 146.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 146.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 146.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 146.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 146.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 145.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 145.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 145.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 145.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 145.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 145.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 145.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 145.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 145.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 144.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 144.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 144.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 144.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 144.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 144.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 144.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 143.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 143.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 143.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 143.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 143.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 143.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 142.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 142.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 142.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 141.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 140.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 139.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 139.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 139.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 139.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 139.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 138.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 138.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 138.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 138.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 138.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 138.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 138.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 138.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 138.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 138.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 137.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 136.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 136.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 136.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 135.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 134.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 134.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 134.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 134.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 133.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 132.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 132.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 132.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 132.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 131.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 131.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 131.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 130.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 130.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 130.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 130.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 130.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 130.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 130.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 129.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 129.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 128.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 128.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 128.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 127.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 127.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 127.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 127.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 126.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 125.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 125.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 125.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 125.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 125.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 125.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 124.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 124.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 123.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 123.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 123.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 123.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 123.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 123.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 122.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 121.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 121.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 121.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 121.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 121.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 121.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 121.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 121.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 121.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 120.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 120.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 120.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 120.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 119.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 118.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 118.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 118.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 117.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 117.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 117.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 116.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 116.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 116.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 115.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 115.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 115.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 114.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 113.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 113.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 113.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 113.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 113.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 112.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 112.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 111.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 111.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 111.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 111.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 111.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 111.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 110.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 110.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 110.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 110.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 109.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 109.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 109.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 108.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 108.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 108.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 108.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 108.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 107.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 106.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 106.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 106.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 106.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 106.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 106.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 106.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 105.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 105.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 105.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 105.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 105.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 105.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 105.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 104.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 104.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 104.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 104.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 103.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 102.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 101.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 101.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 98.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 98.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 97.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 96.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 96.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 95.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 93.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 93.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 92.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 92.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 91.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 91.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 90.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 87.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 86.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 85.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 74.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 73.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 71.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 70.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 70.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 68.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 64.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 75.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 75.3
FF:10164-103B2 76 years, female 75.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 52.6
Pig sample Sample description nTPM
Caudate
nTPM: 52.6
Samples: 4

Max nTPM: 57.8
Min nTPM: 47.3
Sample A Female 47.3
Sample B Female 56.6
Sample C Male 57.8
Sample D Male 48.7

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