HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:164.4 nTPM
HPA:164.4 nTPM
GTEx:143.7 nTPM
FANTOM5:317.4 Scaled Tags Per Million
Pig:91.1 nTPM
Mouse:226.8 nTPM
Allen mouse:19.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003901Antibody HPA008424Antibody CAB005224
Glial cells HighMediumHigh
Neuronal cells HighHighHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 164.4
Sample id Sample description nTPM
Hippocampus
nTPM: 163.3
1898 Male, age 80, left hemisphere 177.5
2529 Female, age 94, left hemisphere 167.2
2621 Female, age 67, right hemisphere 167.1
1911 Female, age 85, right hemisphere 161.4
1855 Male, age 76, left hemisphere 155.0
2148 Female, age 91, left hemisphere 151.4
Dentate gyrus
nTPM: 163.2
2010 Male, age 76, both hemispheres 182.5
2246 Female, age 85, both hemispheres 164.5
2530 Female, age 94, left hemisphere 164.3
1927 Female, age 91, both hemispheres 162.7
2528 Male, age 74, both hemispheres 153.1
2531 Female, age 67, both hemispheres 152.3
Entorhinal gyrus
nTPM: 152.1
1938 Female, age 85, left hemisphere 170.3
2117 Female, age 91, right hemisphere 158.8
1787 Male, age 76, left hemisphere 156.9
2764 Male, age 80, right hemisphere 149.0
2686 Male, age 75, right hemisphere 144.0
2613 Female, age 94, left hemisphere 133.7
Hippocampus, CA1
nTPM: 164.4
2045 Male, age 76, both hemispheres 182.0
1873 Female, age 85, both hemispheres 173.9
2749 Male, age 80, left hemisphere 159.6
2527 Male, age 74, both hemispheres 158.6
2082 Female, age 91, right hemisphere 147.8
Hippocampus, CA2
nTPM: 163.3
2249 Male, age 74, both hemispheres 183.8
1892 Male, age 76, both hemispheres 168.1
1940 Female, age 85, left hemisphere 166.7
1963 Male, age 80, left hemisphere 159.6
2437 Female, age 94, left hemisphere 153.0
2113 Female, age 91, right hemisphere 148.8
Hippocampus, CA3
nTPM: 160.1
1867 Male, age 76, both hemispheres 182.7
2436 Male, age 74, both hemispheres 178.2
1891 Female, age 85, both hemispheres 162.8
2137 Male, age 80, left hemisphere 152.1
2861 Female, age 67, both hemispheres 142.5
2620 Female, age 94, left hemisphere 142.1
Parahippocampal cortex
nTPM: 155.9
2018 Male, age 76, both hemispheres 172.8
2250 Female, age 67, right hemisphere 166.4
1933 Female, age 85, both hemispheres 164.8
1850 Male, age 80, both hemispheres 160.2
2245 Female, age 91, both hemispheres 159.7
1990 Female, age 91, right hemisphere 156.9
2532 Female, age 72, left hemisphere 153.4
2692 Male, age 74, both hemispheres 144.3
2693 Female, age 94, both hemispheres 141.3
2622 Female, age 67, right hemisphere 139.4
Perirhinal gyrus
nTPM: 163.7
1841 Female, age 85, right hemisphere 183.7
1847 Female, age 91, left hemisphere 162.6
2848 Male, age 76, right hemisphere 159.5
2521 Female, age 94, right hemisphere 156.7
1794 Male, age 80, right hemisphere 156.2
Subiculum
nTPM: 159.2
2042 Male, age 76, both hemispheres 169.6
2438 Female, age 94, left hemisphere 164.1
1977 Female, age 85, both hemispheres 163.6
1901 Male, age 80, both hemispheres 159.7
2729 Female, age 91, right hemisphere 150.5
2619 Male, age 74, both hemispheres 147.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 143.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 143.7
Samples: 197

Max nTPM: 557.5
Min nTPM: 75.1
Std nTPM: 58.4
Median nTPM: 130.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 557.5
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 459.6
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 380.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 373.8
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 319.9
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 292.0
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 290.6
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 289.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 277.7
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 254.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 251.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 317.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 317.4
FF:10169-103B7 60 years, female 363.0
FF:10153-102I9 76 years, female 271.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 91.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 90.4
Samples: 4

Max nTPM: 106.4
Min nTPM: 75.9
Sample A Female 106.4
Sample B Female 90.3
Sample C Male 89.0
Sample D Male 75.9
Entorhinal cortex
nTPM: 91.1
Samples: 4

Max nTPM: 102.8
Min nTPM: 83.2
Sample A Female 102.8
Sample B Female 92.2
Sample C Male 86.2
Sample D Male 83.2
Subiculum
nTPM: 86.5
Samples: 4

Max nTPM: 107.1
Min nTPM: 72.9
Sample A Female 107.1
Sample B Female 75.5
Sample C Male 72.9
Sample D Male 90.4
Ventral hippocampus
nTPM: 82.3
Samples: 4

Max nTPM: 96.2
Min nTPM: 68.1
Sample A Female 91.1
Sample B Female 68.1
Sample C Male 73.8
Sample D Male 96.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 226.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 226.8
Samples: 4

Max nTPM: 238.6
Min nTPM: 211.4
Sample A Male 211.4
Sample B Male 222.3
Sample C Female 235.0
Sample D Female 238.6
Hippocampal formation
nTPM: 215.4
Samples: 4

Max nTPM: 238.2
Min nTPM: 195.7
Sample A Male 195.7
Sample B Male 211.6
Sample C Female 216.1
Sample D Female 238.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 19.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.0
79393537 Antisense, RP_071018_02_B03, Mouse strain C57BL/6J (56 days, male) 19.4
75042251 Antisense, RP_060412_02_C05, Mouse strain C57BL/6J (56 days, male) 18.5

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The Human Protein Atlas

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