HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:401.5 nTPM
HPA:401.5 nTPM
GTEx:510.1 nTPM
FANTOM5:640.8 Scaled Tags Per Million
Pig:168.0 nTPM
Mouse:336.9 nTPM
Allen mouse:11.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018886
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 401.5
Sample id Sample description nTPM
Hippocampus
nTPM: 375.5
1898 Male, age 80, left hemisphere 417.4
1855 Male, age 76, left hemisphere 391.3
2621 Female, age 67, right hemisphere 374.6
2148 Female, age 91, left hemisphere 362.1
2529 Female, age 94, left hemisphere 360.6
1911 Female, age 85, right hemisphere 346.8
Dentate gyrus
nTPM: 374.4
1927 Female, age 91, both hemispheres 409.0
2010 Male, age 76, both hemispheres 408.1
2530 Female, age 94, left hemisphere 374.1
2246 Female, age 85, both hemispheres 371.4
2528 Male, age 74, both hemispheres 344.6
2531 Female, age 67, both hemispheres 339.4
Entorhinal gyrus
nTPM: 356.0
1938 Female, age 85, left hemisphere 373.5
2764 Male, age 80, right hemisphere 370.5
1787 Male, age 76, left hemisphere 357.4
2686 Male, age 75, right hemisphere 348.9
2613 Female, age 94, left hemisphere 345.7
2117 Female, age 91, right hemisphere 339.8
Hippocampus, CA1
nTPM: 401.5
2749 Male, age 80, left hemisphere 489.3
1873 Female, age 85, both hemispheres 405.8
2045 Male, age 76, both hemispheres 405.7
2527 Male, age 74, both hemispheres 364.5
2082 Female, age 91, right hemisphere 342.1
Hippocampus, CA2
nTPM: 381.2
1892 Male, age 76, both hemispheres 443.2
1963 Male, age 80, left hemisphere 433.2
2249 Male, age 74, both hemispheres 378.5
2437 Female, age 94, left hemisphere 349.9
2113 Female, age 91, right hemisphere 342.7
1940 Female, age 85, left hemisphere 339.7
Hippocampus, CA3
nTPM: 379.6
2137 Male, age 80, left hemisphere 425.1
2436 Male, age 74, both hemispheres 416.8
1867 Male, age 76, both hemispheres 385.9
2861 Female, age 67, both hemispheres 353.6
1891 Female, age 85, both hemispheres 350.3
2620 Female, age 94, left hemisphere 346.0
Parahippocampal cortex
nTPM: 362.2
2245 Female, age 91, both hemispheres 398.4
1850 Male, age 80, both hemispheres 392.9
1933 Female, age 85, both hemispheres 371.0
2018 Male, age 76, both hemispheres 366.0
2250 Female, age 67, right hemisphere 364.8
2532 Female, age 72, left hemisphere 359.6
1990 Female, age 91, right hemisphere 355.0
2622 Female, age 67, right hemisphere 340.6
2693 Female, age 94, both hemispheres 340.2
2692 Male, age 74, both hemispheres 334.1
Perirhinal gyrus
nTPM: 388.2
1847 Female, age 91, left hemisphere 414.2
1794 Male, age 80, right hemisphere 398.6
1841 Female, age 85, right hemisphere 389.7
2848 Male, age 76, right hemisphere 374.1
2521 Female, age 94, right hemisphere 364.6
Subiculum
nTPM: 354.0
1901 Male, age 80, both hemispheres 374.4
1977 Female, age 85, both hemispheres 367.5
2438 Female, age 94, left hemisphere 364.7
2042 Male, age 76, both hemispheres 351.6
2619 Male, age 74, both hemispheres 336.0
2729 Female, age 91, right hemisphere 329.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 510.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 510.1
Samples: 197

Max nTPM: 1190.2
Min nTPM: 206.9
Std nTPM: 204.7
Median nTPM: 482.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 1190.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 1182.1
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 1090.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 1062.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1050.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 997.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 967.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 937.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 918.3
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 902.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 896.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 640.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 640.8
FF:10169-103B7 60 years, female 759.6
FF:10153-102I9 76 years, female 522.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 168.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 168.0
Samples: 4

Max nTPM: 219.4
Min nTPM: 129.6
Sample A Female 219.4
Sample B Female 161.6
Sample C Male 161.4
Sample D Male 129.6
Entorhinal cortex
nTPM: 139.1
Samples: 4

Max nTPM: 158.3
Min nTPM: 124.6
Sample A Female 158.3
Sample B Female 149.0
Sample C Male 124.6
Sample D Male 124.6
Subiculum
nTPM: 149.1
Samples: 4

Max nTPM: 212.3
Min nTPM: 115.2
Sample A Female 212.3
Sample B Female 136.4
Sample C Male 132.6
Sample D Male 115.2
Ventral hippocampus
nTPM: 165.7
Samples: 4

Max nTPM: 189.1
Min nTPM: 119.8
Sample A Female 176.9
Sample B Female 119.8
Sample C Male 189.1
Sample D Male 177.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 336.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 315.5
Samples: 4

Max nTPM: 343.9
Min nTPM: 283.6
Sample A Male 283.6
Sample B Male 318.4
Sample C Female 343.9
Sample D Female 316.1
Hippocampal formation
nTPM: 336.9
Samples: 4

Max nTPM: 387.5
Min nTPM: 317.3
Sample A Male 387.5
Sample B Male 319.2
Sample C Female 317.3
Sample D Female 323.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.4
1786 Antisense, RP_040526_02_H04, Mouse strain C57BL/6J (56 days, male) 11.4
1787 Antisense, RP_040526_02_H04, Mouse strain C57BL/6J (56 days, male) 9.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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