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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:178.5 nTPM
FANTOM5:893.0 Scaled Tags Per Million
Pig:140.9 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA006361Antibody CAB002572
Glial cells Not detectedNot detected
Neuronal cells LowNot detected




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 178.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 178.5
Samples: 246

Max nTPM: 595.2
Min nTPM: 17.9
Std nTPM: 104.7
Median nTPM: 158.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 595.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 518.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 472.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 455.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 452.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 447.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 442.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 427.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 410.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 406.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 394.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 384.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 378.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 370.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 370.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 366.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 362.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 356.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 351.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 347.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 340.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 338.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 336.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 325.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 322.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 322.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 314.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 312.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 309.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 303.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 301.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 296.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 295.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 293.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 292.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 288.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 286.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 284.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 283.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 281.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 280.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 280.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 277.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 275.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 275.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 274.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 273.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 266.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 263.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 258.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 258.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 253.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 252.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 250.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 249.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 247.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 247.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 244.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 243.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 241.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 241.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 240.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 237.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 235.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 233.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 232.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 231.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 231.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 230.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 227.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 225.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 224.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 223.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 221.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 220.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 220.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 220.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 216.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 212.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 212.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 211.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 210.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 210.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 209.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 209.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 203.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 198.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 197.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 196.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 196.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 196.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 195.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 194.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 193.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 192.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 190.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 183.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 182.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 182.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 181.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 181.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 181.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 179.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 178.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 171.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 170.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 170.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 168.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 166.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 166.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 165.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 164.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 163.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 162.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 161.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 161.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 160.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 160.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 160.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 159.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 159.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 159.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 158.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 157.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 156.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 156.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 154.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 154.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 151.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 148.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 146.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 144.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 144.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 143.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 143.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 141.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 140.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 140.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 140.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 139.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 138.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 138.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 138.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 137.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 136.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 132.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 131.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 130.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 129.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 128.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 127.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 127.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 127.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 126.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 124.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 123.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 121.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 121.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 121.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 121.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 118.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 117.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 116.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 115.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 115.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 114.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 113.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 112.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 112.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 111.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 109.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 109.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 109.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 108.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 108.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 107.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 107.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 106.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 106.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 106.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 106.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 105.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 102.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 101.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 101.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 100.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 100.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 100.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 99.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 98.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 95.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 92.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 92.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 91.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 89.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 89.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 88.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 88.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 87.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 87.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 86.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 85.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 84.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 84.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 83.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 82.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 80.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 79.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 77.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 75.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 75.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 73.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 73.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 70.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 69.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 69.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 69.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 69.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 65.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 65.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 64.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 64.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 60.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 59.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 59.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 59.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 58.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 54.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 53.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 53.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 51.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 49.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 48.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 47.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 45.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 45.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 44.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 39.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 37.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 37.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 37.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 36.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 27.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 25.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 19.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 17.9
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 893.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 893.0
FF:10164-103B2 76 years, female 893.0

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 140.9
Pig sample Sample description nTPM
Caudate
nTPM: 140.9
Samples: 4

Max nTPM: 160.1
Min nTPM: 133.3
Sample A Female 134.5
Sample B Female 135.6
Sample C Male 133.3
Sample D Male 160.1

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