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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:258.1 nTPM
HPA:258.1 nTPM
FANTOM5:249.3 Scaled Tags Per Million
Pig:15.9 nTPM
Allen mouse:9.8 Expression energy

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max nTPM 258.1
Sample id Sample description nTPM
Area postrema
nTPM: 248.5
2799 Male, age 61, both hemispheres 253.3
2306 Male, age 80, both hemispheres 248.6
2054 Male, age 76, both hemispheres 243.4
Cuneate nuclei
nTPM: 230.4
2381 Male, age 80, both hemispheres 235.0
2376 Male, age 61, both hemispheres 229.8
2131 Male, age 76, both hemispheres 226.4
Dorsal medullary reticular nucleus
nTPM: 230.2
2040 Female, age 85, both hemispheres 234.8
2373 Male, age 61, both hemispheres 229.1
2088 Male, age 76, both hemispheres 226.7
Dorsal motor vagal complex
nTPM: 231.5
2813 Female, age 72, unknown 237.8
2133 Female, age 91, both hemispheres 237.7
2000 Male, age 74, unknown 237.4
2844 Male, age 55, unknown 237.1
2185 Male, age 76, both hemispheres 232.2
2807 Female, age 85, both hemispheres 226.8
2643 Male, age 74, both hemispheres 223.4
2797 Male, age 61, both hemispheres 219.9
Gigantocellular reticular nuclei, medullary
nTPM: 232.1
2314 Male, age 61, both hemispheres 245.6
1876 Female, age 85, both hemispheres 233.3
2462 Male, age 74, both hemispheres 231.2
2022 Male, age 76, right hemisphere 229.2
2387 Female, age 91, both hemispheres 227.3
2310 Male, age 80, both hemispheres 225.8
Gigantocellular reticular nuclei, pars
nTPM: 230.4
2336 Male, age 61, both hemispheres 237.3
2084 Female, age 85, both hemispheres 231.5
2706 Male, age 80, both hemispheres 229.6
2330 Male, age 80, both hemispheres 228.4
2168 Male, age 76, both hemispheres 225.0
Inferior olive
nTPM: 242.6
2563 Male, age 74, both hemispheres 255.4
2178 Male, age 61, both hemispheres 247.0
2085 Female, age 85, both hemispheres 241.8
2628 Female, age 91, both hemispheres 237.5
2379 Male, age 80, both hemispheres 231.3
Lateral medullary reticular nucleus
nTPM: 243.7
2305 Male, age 74, both hemispheres 258.6
2852 Male, age 80, both hemispheres 246.8
2374 Male, age 61, both hemispheres 245.1
2044 Male, age 76, both hemispheres 237.5
2190 Female, age 85, both hemispheres 237.1
2804 Female, age 91, both hemispheres 237.0
Medial vestibular nucleus
nTPM: 239.6
2624 Male, age 61, both hemispheres 251.2
2801 Male, age 74, both hemispheres 247.6
2134 Male, age 76, both hemispheres 237.1
2803 Female, age 91, both hemispheres 236.0
2743 Female, age 85, both hemispheres 233.5
2093 Male, age 80, both hemispheres 232.2
Motor hypoglossal nucleus
nTPM: 234.4
2182 Male, age 80, both hemispheres 236.6
2132 Female, age 85, both hemispheres 235.9
2125 Female, age 91, both hemispheres 234.3
2277 Male, age 76, both hemispheres 232.9
2461 Male, age 61, both hemispheres 232.3
Nucleus ambiguus
nTPM: 241.3
2071 Male, age 76, both hemispheres 248.3
2096 Female, age 85, both hemispheres 234.2
Nucleus cuneatus
nTPM: 231.5
2808 Female, age 85, both hemispheres 242.1
2380 Male, age 80, both hemispheres 240.8
2564 Male, age 74, both hemispheres 237.3
2100 Male, age 76, both hemispheres 225.3
2562 Male, age 61, both hemispheres 224.1
2805 Female, age 91, both hemispheres 219.6
Nucleus gracilis
nTPM: 239.0
2627 Male, age 74, both hemispheres 244.5
2382 Male, age 80, both hemispheres 239.2
2299 Female, age 85, both hemispheres 233.2
Nucleus raphe magnus
nTPM: 227.5
2455 Male, age 74, both hemispheres 240.4
2051 Male, age 76, both hemispheres 232.4
2172 Female, age 85, both hemispheres 225.0
2328 Male, age 80, both hemispheres 224.1
2160 Male, age 61, both hemispheres 222.6
2459 Female, age 91, both hemispheres 220.6
Nucleus raphe obscurus
nTPM: 244.3
2800 Male, age 61, midline 250.7
2142 Male, age 76, midline 243.0
2845 Female, age 85, midline 239.0
Nucleus raphe pallidus
nTPM: 258.1
1924 Male, age 61, midline 289.7
2183 Male, age 80, midline 244.5
2145 Male, age 76, midline 240.1
Nucleus tractus solitarii
nTPM: 234.1
2144 Female, age 91, right hemisphere 237.9
2191 Female, age 85, both hemispheres 237.0
2656 Male, age 76, both hemispheres 234.8
2307 Male, age 80, both hemispheres 226.7
Parvicellular reticular nuclei
nTPM: 226.8
2119 Male, age 80, both hemispheres 236.6
2095 Male, age 76, both hemispheres 230.2
2558 Male, age 74, both hemispheres 213.5
Parvicellular reticular nuclei, medullary
nTPM: 232.4
2091 Female, age 85, both hemispheres 234.5
2189 Female, age 91, both hemispheres 233.1
2181 Male, age 80, left hemisphere 229.6
Peritrigeminal nucleus
nTPM: 250.1
2067 Female, age 85, both hemispheres 263.1
2179 Male, age 61, both hemispheres 248.5
2136 Male, age 76, both hemispheres 238.5
Prepositus hypoglossal nucleus
nTPM: 237.3
2855 Female, age 85, right hemisphere 238.3
2086 Male, age 80, both hemispheres 236.3
Spinal trigeminal nucleus, caudal
nTPM: 233.0
2312 Male, age 61, both hemispheres 240.0
2390 Female, age 91, both hemispheres 234.4
2308 Male, age 80, both hemispheres 231.8
2447 Male, age 76, both hemispheres 229.9
2642 Male, age 74, both hemispheres 228.8
Spinal trigeminal nucleus, interpolar
nTPM: 234.2
2066 Male, age 76, right hemisphere 238.2
2625 Male, age 61, both hemispheres 236.1
2033 Male, age 80, both hemispheres 235.0
2386 Female, age 85, both hemispheres 233.8
2389 Female, age 91, both hemispheres 227.9
Spinal vestibular nucleus
nTPM: 233.0
2748 Male, age 76, both hemispheres 240.3
2796 Male, age 61, both hemispheres 236.7
2806 Female, age 85, both hemispheres 234.6
2780 Male, age 80, both hemispheres 233.8
2186 Female, age 91, both hemispheres 231.8
2384 Male, age 74, both hemispheres 221.1
Ventral medullary reticular nucleus
nTPM: 233.0
2372 Male, age 61, both hemispheres 234.7
2060 Male, age 76, both hemispheres 231.4
Ventrolateral medulla, A1-C1 cell groups
nTPM: 240.1
2180 Male, age 61, both hemispheres 248.4
2741 Female, age 85, both hemispheres 242.0
2118 Male, age 80, both hemispheres 239.4
1986 Male, age 76, both hemispheres 238.0
2302 Female, age 91, both hemispheres 232.9

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 249.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 249.3
FF:10038-101F2 18-64 years, mixed 305.6
FF:10155-103A2 76 years, female 248.4
FF:10174-103C3 60 years, female 193.8

MEDULLA OBLONGATA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 15.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 15.9
Samples: 4

Max nTPM: 17.6
Min nTPM: 14.1
Sample A Female 15.1
Sample B Female 14.1
Sample C Male 16.7
Sample D Male 17.6

MEDULLA OBLONGATA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 9.8
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 9.8
74580984 Antisense, RP_060215_02_C08, Mouse strain C57BL/6J (56 days, male) 9.8

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