We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
PPIB
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • PPIB
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:132.3 nTPM
FANTOM5:242.3 Scaled Tags Per Million
Pig:9.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA012720Antibody CAB011487
Glial cells MediumMedium
Neuronal cells LowNot detected





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 132.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 132.3
Samples: 246

Max nTPM: 295.1
Min nTPM: 65.5
Std nTPM: 34.3
Median nTPM: 127.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 295.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 247.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 234.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 229.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 221.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 214.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 213.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 212.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 210.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 203.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 198.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 194.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 193.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 193.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 192.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 191.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 189.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 187.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 186.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 185.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 183.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 181.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 180.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 179.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 177.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 176.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 172.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 170.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 169.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 169.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 168.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 167.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 167.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 167.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 167.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 166.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 165.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 164.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 162.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 161.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 161.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 161.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 160.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 160.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 159.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 159.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 159.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 159.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 159.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 158.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 158.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 156.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 156.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 155.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 155.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 154.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 154.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 154.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 153.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 152.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 152.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 151.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 151.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 149.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 149.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 149.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 148.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 148.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 147.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 147.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 146.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 144.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 144.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 144.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 143.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 143.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 143.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 142.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 142.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 140.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 140.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 140.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 139.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 139.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 138.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 138.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 137.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 136.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 136.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 136.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 136.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 136.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 136.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 136.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 136.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 135.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 134.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 134.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 134.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 134.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 133.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 133.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 133.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 132.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 132.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 132.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 132.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 132.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 131.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 131.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 131.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 130.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 129.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 129.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 129.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 129.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 128.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 128.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 128.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 128.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 128.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 127.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 127.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 127.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 126.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 126.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 124.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 124.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 124.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 124.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 124.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 123.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 123.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 123.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 123.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 123.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 123.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 123.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 122.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 122.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 122.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 122.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 122.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 121.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 121.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 121.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 121.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 120.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 120.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 120.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 120.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 119.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 119.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 119.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 119.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 119.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 119.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 117.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 117.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 117.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 117.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 117.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 116.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 115.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 115.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 115.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 115.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 115.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 114.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 114.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 113.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 113.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 113.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 113.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 112.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 111.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 110.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 110.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 110.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 110.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 109.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 109.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 109.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 108.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 108.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 107.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 106.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 105.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 104.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 104.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 104.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 104.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 104.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 104.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 104.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 104.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 104.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 103.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 103.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 103.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 103.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 103.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 101.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 101.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 101.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 100.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 100.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 100.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 100.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 100.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 99.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 99.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 99.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 99.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 98.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 98.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 97.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 95.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 95.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 94.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 94.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 94.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 93.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 93.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 93.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 92.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 92.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 89.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 89.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 89.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 89.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 89.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 89.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 86.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 84.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 84.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 83.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 82.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 81.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 77.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 74.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 73.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 72.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 71.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 68.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 65.5
Show allShow less

CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 242.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 242.3
FF:10164-103B2 76 years, female 242.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 9.6
Pig sample Sample description nTPM
Caudate
nTPM: 9.6
Samples: 4

Max nTPM: 10.3
Min nTPM: 9.2
Sample A Female 9.2
Sample B Female 10.3
Sample C Male 9.6
Sample D Male 9.4

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.