HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:57.8 nTPM
HPA:57.8 nTPM
GTEx:59.6 nTPM
FANTOM5:40.9 Scaled Tags Per Million
Pig:45.2 nTPM
Mouse:34.6 nTPM
Allen mouse:2.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041714
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 57.8
Sample id Sample description nTPM
Hippocampus
nTPM: 53.1
1898 Male, age 80, left hemisphere 56.0
1855 Male, age 76, left hemisphere 54.1
2529 Female, age 94, left hemisphere 54.1
1911 Female, age 85, right hemisphere 53.1
2621 Female, age 67, right hemisphere 51.4
2148 Female, age 91, left hemisphere 49.9
Dentate gyrus
nTPM: 53.6
2530 Female, age 94, left hemisphere 57.3
2010 Male, age 76, both hemispheres 55.3
1927 Female, age 91, both hemispheres 54.4
2246 Female, age 85, both hemispheres 54.3
2528 Male, age 74, both hemispheres 51.5
2531 Female, age 67, both hemispheres 49.0
Entorhinal gyrus
nTPM: 54.1
2764 Male, age 80, right hemisphere 57.9
1938 Female, age 85, left hemisphere 55.9
1787 Male, age 76, left hemisphere 54.9
2117 Female, age 91, right hemisphere 52.1
2686 Male, age 75, right hemisphere 52.0
2613 Female, age 94, left hemisphere 51.8
Hippocampus, CA1
nTPM: 54.3
2749 Male, age 80, left hemisphere 58.1
2045 Male, age 76, both hemispheres 54.8
1873 Female, age 85, both hemispheres 53.7
2527 Male, age 74, both hemispheres 53.6
2082 Female, age 91, right hemisphere 51.5
Hippocampus, CA2
nTPM: 55.6
1892 Male, age 76, both hemispheres 59.9
1963 Male, age 80, left hemisphere 58.7
2249 Male, age 74, both hemispheres 57.0
1940 Female, age 85, left hemisphere 54.8
2437 Female, age 94, left hemisphere 52.4
2113 Female, age 91, right hemisphere 50.6
Hippocampus, CA3
nTPM: 53.1
2137 Male, age 80, left hemisphere 57.0
1867 Male, age 76, both hemispheres 55.9
1891 Female, age 85, both hemispheres 53.1
2436 Male, age 74, both hemispheres 51.8
2620 Female, age 94, left hemisphere 51.1
2861 Female, age 67, both hemispheres 50.0
Parahippocampal cortex
nTPM: 53.3
1850 Male, age 80, both hemispheres 56.9
1933 Female, age 85, both hemispheres 55.5
2018 Male, age 76, both hemispheres 54.8
2245 Female, age 91, both hemispheres 54.3
2250 Female, age 67, right hemisphere 53.2
2532 Female, age 72, left hemisphere 53.2
1990 Female, age 91, right hemisphere 52.6
2693 Female, age 94, both hemispheres 51.5
2692 Male, age 74, both hemispheres 50.8
2622 Female, age 67, right hemisphere 50.2
Perirhinal gyrus
nTPM: 57.8
1847 Female, age 91, left hemisphere 61.7
1794 Male, age 80, right hemisphere 59.9
1841 Female, age 85, right hemisphere 57.3
2848 Male, age 76, right hemisphere 55.3
2521 Female, age 94, right hemisphere 54.7
Subiculum
nTPM: 53.6
1977 Female, age 85, both hemispheres 58.2
1901 Male, age 80, both hemispheres 55.4
2042 Male, age 76, both hemispheres 52.6
2729 Female, age 91, right hemisphere 52.1
2438 Female, age 94, left hemisphere 51.7
2619 Male, age 74, both hemispheres 51.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 59.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 59.6
Samples: 197

Max nTPM: 141.8
Min nTPM: 15.6
Std nTPM: 21.6
Median nTPM: 56.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 141.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 136.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 131.3
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 123.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 113.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 110.6
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 105.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 104.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 100.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 99.3
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 98.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.9
FF:10169-103B7 60 years, female 52.3
FF:10153-102I9 76 years, female 29.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 45.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 45.2
Samples: 4

Max nTPM: 61.2
Min nTPM: 30.2
Sample A Female 61.2
Sample B Female 43.6
Sample C Male 45.6
Sample D Male 30.2
Entorhinal cortex
nTPM: 36.6
Samples: 4

Max nTPM: 45.1
Min nTPM: 27.1
Sample A Female 38.8
Sample B Female 45.1
Sample C Male 35.5
Sample D Male 27.1
Subiculum
nTPM: 38.4
Samples: 4

Max nTPM: 59.3
Min nTPM: 28.1
Sample A Female 59.3
Sample B Female 33.4
Sample C Male 32.7
Sample D Male 28.1
Ventral hippocampus
nTPM: 43.6
Samples: 4

Max nTPM: 50.7
Min nTPM: 35.2
Sample A Female 47.7
Sample B Female 35.2
Sample C Male 50.7
Sample D Male 40.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 34.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.9
Samples: 4

Max nTPM: 33.4
Min nTPM: 27.6
Sample A Male 27.6
Sample B Male 29.7
Sample C Female 32.8
Sample D Female 33.4
Hippocampal formation
nTPM: 34.6
Samples: 4

Max nTPM: 41.1
Min nTPM: 30.4
Sample A Male 41.1
Sample B Male 30.4
Sample C Female 34.9
Sample D Female 31.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.1
68744630 Antisense, RP_050208_01_C08, Mouse strain C57BL/6J (56 days, male) 2.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.