HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:72.9 nTPM
HPA:72.9 nTPM
GTEx:88.3 nTPM
FANTOM5:68.6 Scaled Tags Per Million
Pig:5.5 nTPM
Mouse:2.0 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 72.9
Sample id Sample description nTPM
Hippocampus
nTPM: 59.7
2621 Female, age 67, right hemisphere 65.1
1911 Female, age 85, right hemisphere 64.5
2529 Female, age 94, left hemisphere 60.1
1898 Male, age 80, left hemisphere 59.7
1855 Male, age 76, left hemisphere 54.8
2148 Female, age 91, left hemisphere 53.8
Dentate gyrus
nTPM: 62.7
2530 Female, age 94, left hemisphere 90.2
2528 Male, age 74, both hemispheres 61.6
2010 Male, age 76, both hemispheres 61.5
2531 Female, age 67, both hemispheres 56.3
2246 Female, age 85, both hemispheres 56.1
1927 Female, age 91, both hemispheres 50.6
Entorhinal gyrus
nTPM: 62.3
2117 Female, age 91, right hemisphere 79.2
2764 Male, age 80, right hemisphere 69.3
1938 Female, age 85, left hemisphere 58.1
1787 Male, age 76, left hemisphere 56.4
2613 Female, age 94, left hemisphere 55.8
2686 Male, age 75, right hemisphere 55.0
Hippocampus, CA1
nTPM: 54.7
2527 Male, age 74, both hemispheres 59.1
1873 Female, age 85, both hemispheres 58.4
2749 Male, age 80, left hemisphere 55.3
2082 Female, age 91, right hemisphere 54.9
2045 Male, age 76, both hemispheres 45.9
Hippocampus, CA2
nTPM: 62.7
2249 Male, age 74, both hemispheres 69.9
1963 Male, age 80, left hemisphere 67.7
2437 Female, age 94, left hemisphere 66.0
1940 Female, age 85, left hemisphere 62.5
2113 Female, age 91, right hemisphere 57.9
1892 Male, age 76, both hemispheres 52.2
Hippocampus, CA3
nTPM: 53.6
1891 Female, age 85, both hemispheres 68.5
1867 Male, age 76, both hemispheres 57.7
2436 Male, age 74, both hemispheres 55.4
2137 Male, age 80, left hemisphere 48.6
2620 Female, age 94, left hemisphere 46.6
2861 Female, age 67, both hemispheres 44.8
Parahippocampal cortex
nTPM: 56.9
2532 Female, age 72, left hemisphere 68.0
2692 Male, age 74, both hemispheres 66.2
1990 Female, age 91, right hemisphere 60.5
2245 Female, age 91, both hemispheres 58.1
1850 Male, age 80, both hemispheres 57.6
2018 Male, age 76, both hemispheres 57.2
1933 Female, age 85, both hemispheres 55.3
2693 Female, age 94, both hemispheres 50.9
2250 Female, age 67, right hemisphere 50.4
2622 Female, age 67, right hemisphere 45.0
Perirhinal gyrus
nTPM: 50.4
2848 Male, age 76, right hemisphere 52.1
2521 Female, age 94, right hemisphere 51.6
1794 Male, age 80, right hemisphere 51.3
1847 Female, age 91, left hemisphere 49.1
1841 Female, age 85, right hemisphere 48.1
Subiculum
nTPM: 72.9
2042 Male, age 76, both hemispheres 92.7
1901 Male, age 80, both hemispheres 81.7
2438 Female, age 94, left hemisphere 72.1
1977 Female, age 85, both hemispheres 67.0
2619 Male, age 74, both hemispheres 65.6
2729 Female, age 91, right hemisphere 58.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 88.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 88.3
Samples: 197

Max nTPM: 388.4
Min nTPM: 4.7
Std nTPM: 66.7
Median nTPM: 72.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 388.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 353.5
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 336.1
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 300.2
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 257.8
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 226.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 223.4
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 220.9
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 220.0
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 218.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 208.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 68.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 68.6
FF:10169-103B7 60 years, female 71.1
FF:10153-102I9 76 years, female 66.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 5.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 5.5
Samples: 4

Max nTPM: 9.9
Min nTPM: 1.4
Sample A Female 7.8
Sample B Female 2.8
Sample C Male 9.9
Sample D Male 1.4
Entorhinal cortex
nTPM: 0.3
Samples: 4

Max nTPM: 0.5
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.5
Sample C Male 0.2
Sample D Male 0.4
Subiculum
nTPM: 1.2
Samples: 4

Max nTPM: 2.4
Min nTPM: 0.5
Sample A Female 0.5
Sample B Female 1.2
Sample C Male 0.7
Sample D Male 2.4
Ventral hippocampus
nTPM: 3.8
Samples: 4

Max nTPM: 5.9
Min nTPM: 0.4
Sample A Female 5.9
Sample B Female 0.4
Sample C Male 4.2
Sample D Male 4.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 2.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.0
Samples: 4

Max nTPM: 3.5
Min nTPM: 0.7
Sample A Male 2.3
Sample B Male 3.5
Sample C Female 1.4
Sample D Female 0.7
Hippocampal formation
nTPM: 1.4
Samples: 4

Max nTPM: 1.6
Min nTPM: 1.0
Sample A Male 1.6
Sample B Male 1.4
Sample C Female 1.0
Sample D Female 1.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
70565129 Antisense, RP_050623_04_C08, Mouse strain C57BL/6J (56 days, male) 1.4
74988616 Antisense, RP_060315_05_F09, Mouse strain C57BL/6J (56 days, male) 0.3

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