HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:369.6 nTPM
HPA:369.6 nTPM
GTEx:308.1 nTPM
FANTOM5:203.6 Scaled Tags Per Million
Pig:333.9 nTPM
Mouse:335.0 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB008713
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 369.6
Sample id Sample description nTPM
Hippocampus
nTPM: 349.5
1898 Male, age 80, left hemisphere 400.3
2621 Female, age 67, right hemisphere 352.6
2529 Female, age 94, left hemisphere 343.5
2148 Female, age 91, left hemisphere 340.9
1855 Male, age 76, left hemisphere 332.3
1911 Female, age 85, right hemisphere 327.2
Dentate gyrus
nTPM: 352.3
1927 Female, age 91, both hemispheres 376.6
2528 Male, age 74, both hemispheres 361.9
2530 Female, age 94, left hemisphere 361.7
2010 Male, age 76, both hemispheres 360.5
2246 Female, age 85, both hemispheres 342.1
2531 Female, age 67, both hemispheres 311.2
Entorhinal gyrus
nTPM: 341.0
2764 Male, age 80, right hemisphere 369.3
1938 Female, age 85, left hemisphere 357.8
1787 Male, age 76, left hemisphere 344.3
2117 Female, age 91, right hemisphere 335.6
2613 Female, age 94, left hemisphere 329.6
2686 Male, age 75, right hemisphere 309.6
Hippocampus, CA1
nTPM: 369.6
2749 Male, age 80, left hemisphere 449.7
2527 Male, age 74, both hemispheres 372.6
1873 Female, age 85, both hemispheres 365.4
2082 Female, age 91, right hemisphere 337.6
2045 Male, age 76, both hemispheres 322.8
Hippocampus, CA2
nTPM: 361.1
1963 Male, age 80, left hemisphere 393.0
2249 Male, age 74, both hemispheres 388.7
1892 Male, age 76, both hemispheres 380.4
2437 Female, age 94, left hemisphere 354.3
2113 Female, age 91, right hemisphere 329.6
1940 Female, age 85, left hemisphere 320.7
Hippocampus, CA3
nTPM: 349.2
2436 Male, age 74, both hemispheres 389.1
2137 Male, age 80, left hemisphere 367.3
1867 Male, age 76, both hemispheres 351.2
2620 Female, age 94, left hemisphere 350.7
1891 Female, age 85, both hemispheres 323.6
2861 Female, age 67, both hemispheres 313.5
Parahippocampal cortex
nTPM: 344.9
2250 Female, age 67, right hemisphere 365.6
1990 Female, age 91, right hemisphere 364.5
1850 Male, age 80, both hemispheres 362.6
1933 Female, age 85, both hemispheres 362.5
2245 Female, age 91, both hemispheres 355.9
2532 Female, age 72, left hemisphere 332.8
2622 Female, age 67, right hemisphere 332.7
2693 Female, age 94, both hemispheres 328.4
2692 Male, age 74, both hemispheres 324.5
2018 Male, age 76, both hemispheres 319.3
Perirhinal gyrus
nTPM: 366.2
1847 Female, age 91, left hemisphere 412.3
1794 Male, age 80, right hemisphere 392.5
1841 Female, age 85, right hemisphere 349.4
2521 Female, age 94, right hemisphere 347.4
2848 Male, age 76, right hemisphere 329.2
Subiculum
nTPM: 339.8
1977 Female, age 85, both hemispheres 354.9
2438 Female, age 94, left hemisphere 353.2
2619 Male, age 74, both hemispheres 352.2
1901 Male, age 80, both hemispheres 348.5
2729 Female, age 91, right hemisphere 331.6
2042 Male, age 76, both hemispheres 298.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 308.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 308.1
Samples: 197

Max nTPM: 586.5
Min nTPM: 104.9
Std nTPM: 100.9
Median nTPM: 293.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 586.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 582.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 563.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 549.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 534.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 518.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 517.1
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 516.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 515.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 501.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 490.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 203.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 203.6
FF:10169-103B7 60 years, female 238.5
FF:10153-102I9 76 years, female 168.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 333.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 333.9
Samples: 4

Max nTPM: 456.7
Min nTPM: 259.8
Sample A Female 456.7
Sample B Female 308.8
Sample C Male 310.3
Sample D Male 259.8
Entorhinal cortex
nTPM: 293.4
Samples: 4

Max nTPM: 348.5
Min nTPM: 238.4
Sample A Female 302.1
Sample B Female 348.5
Sample C Male 284.7
Sample D Male 238.4
Subiculum
nTPM: 300.2
Samples: 4

Max nTPM: 406.3
Min nTPM: 254.1
Sample A Female 406.3
Sample B Female 279.5
Sample C Male 254.1
Sample D Male 261.0
Ventral hippocampus
nTPM: 316.0
Samples: 4

Max nTPM: 407.5
Min nTPM: 225.7
Sample A Female 358.6
Sample B Female 225.7
Sample C Male 407.5
Sample D Male 272.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 335.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 325.4
Samples: 4

Max nTPM: 349.5
Min nTPM: 306.9
Sample A Male 306.9
Sample B Male 325.3
Sample C Female 349.5
Sample D Female 319.9
Hippocampal formation
nTPM: 335.0
Samples: 4

Max nTPM: 382.5
Min nTPM: 302.1
Sample A Male 382.5
Sample B Male 302.1
Sample C Female 322.5
Sample D Female 332.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
75233570 Antisense, RP_051121_03_C01, Mouse strain C57BL/6J (56 days, male) 0.6

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