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ATP5PD
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:313.1 nTPM
FANTOM5:173.7 Scaled Tags Per Million
Pig:116.4 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA042777Antibody HPA048459
Glial cells MediumNot detected
Neuronal cells MediumMedium




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 313.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 313.1
Samples: 246

Max nTPM: 775.3
Min nTPM: 161.8
Std nTPM: 93.6
Median nTPM: 295.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 775.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 688.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 682.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 663.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 616.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 606.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 580.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 520.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 508.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 499.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 483.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 478.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 477.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 475.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 475.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 460.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 456.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 450.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 445.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 445.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 443.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 442.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 433.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 432.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 430.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 425.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 423.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 419.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 414.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 413.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 398.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 397.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 395.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 395.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 394.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 392.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 391.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 391.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 391.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 388.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 387.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 386.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 379.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 376.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 375.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 375.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 375.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 370.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 369.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 367.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 363.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 359.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 358.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 355.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 355.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 355.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 355.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 354.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 352.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 352.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 352.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 352.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 349.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 349.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 348.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 347.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 345.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 345.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 343.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 342.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 342.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 341.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 340.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 338.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 337.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 336.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 336.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 336.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 334.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 330.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 329.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 329.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 328.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 328.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 327.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 327.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 327.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 326.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 325.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 324.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 322.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 322.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 322.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 318.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 316.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 316.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 316.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 315.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 314.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 313.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 313.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 313.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 312.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 312.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 311.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 310.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 310.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 309.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 308.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 308.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 307.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 307.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 306.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 304.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 304.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 304.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 303.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 303.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 301.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 300.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 300.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 296.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 296.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 295.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 295.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 293.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 292.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 292.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 290.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 288.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 287.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 286.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 286.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 286.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 286.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 284.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 283.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 283.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 282.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 282.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 282.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 281.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 281.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 281.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 280.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 279.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 279.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 278.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 277.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 276.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 276.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 276.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 275.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 273.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 271.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 270.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 269.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 269.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 269.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 269.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 269.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 267.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 267.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 267.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 264.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 262.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 262.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 261.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 261.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 261.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 260.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 259.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 258.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 257.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 257.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 256.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 254.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 252.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 252.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 251.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 251.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 251.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 250.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 250.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 249.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 249.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 249.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 248.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 247.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 247.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 247.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 245.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 245.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 242.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 242.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 241.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 241.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 239.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 238.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 237.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 236.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 236.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 235.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 234.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 234.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 233.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 231.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 230.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 229.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 229.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 228.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 227.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 226.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 225.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 224.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 223.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 222.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 220.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 220.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 220.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 219.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 218.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 217.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 217.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 216.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 216.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 216.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 214.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 214.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 213.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 210.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 206.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 204.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 203.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 199.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 199.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 197.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 192.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 192.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 189.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 184.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 179.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 178.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 176.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 176.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 161.8
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 173.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 173.7
FF:10164-103B2 76 years, female 173.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 116.4
Pig sample Sample description nTPM
Caudate
nTPM: 116.5
Samples: 4

Max nTPM: 134.3
Min nTPM: 105.8
Sample A Female 105.8
Sample B Female 119.9
Sample C Male 134.3
Sample D Male 105.8

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