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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:211.7 nTPM
GTEx:211.7 nTPM
FANTOM5:491.0 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA041411
Squamous epithelial cells High


VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 211.7
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 211.7
Samples: 156

Max nTPM: 327.1
Min nTPM: 117.5
Std nTPM: 39.0
Median nTPM: 207.8
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 327.1
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 311.1
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 296.7
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 291.0
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 290.7
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 289.3
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 288.6
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 280.6
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 276.4
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 275.0
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 272.2
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 270.3
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 268.1
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 267.9
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 265.8
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 265.8
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 264.1
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 259.7
GTEX-11I78-2026-SM-5987C 50-59 years, female 259.6
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 258.5
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 255.7
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 255.3
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 253.9
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 252.8
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 252.6
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 252.5
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 252.5
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 251.8
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 248.4
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 248.0
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 246.9
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 246.7
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 246.4
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 243.5
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 240.4
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 240.2
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 239.1
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 239.0
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 237.1
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 235.1
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 232.9
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 231.6
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 230.0
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 229.9
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 229.9
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 229.8
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 229.8
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 229.6
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 229.6
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 227.7
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 227.3
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 226.2
GTEX-16NPV-2526-SM-6M483 50-59 years, female 225.7
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 225.4
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 223.9
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 223.1
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 222.8
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 222.4
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 221.0
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 220.5
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 219.7
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 219.7
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 219.2
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 218.3
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 218.0
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 217.0
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 216.3
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 212.9
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 212.7
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 211.5
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 210.9
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 210.8
GTEX-S341-1226-SM-4AD5S 40-49 years, female 210.5
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 209.8
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 209.6
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 209.0
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 208.6
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 207.8
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 207.7
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 206.6
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 206.5
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 205.8
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 205.6
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 205.4
GTEX-14PKU-1326-SM-6871B 40-49 years, female 205.0
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 204.9
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 203.7
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 203.3
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 202.0
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 201.4
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 200.5
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 200.2
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 199.3
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 199.3
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 198.9
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 198.3
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 197.7
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 197.6
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 197.0
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 197.0
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 196.9
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 195.1
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 194.9
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 194.6
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 194.6
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 194.5
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 194.4
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 193.7
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 193.7
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 193.0
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 192.3
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 191.4
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 190.9
GTEX-1C475-0526-SM-793AC 40-49 years, female 189.8
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 188.8
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 187.8
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 187.4
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 186.3
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 186.3
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 186.3
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 185.1
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 184.0
GTEX-QCQG-1226-SM-48U23 50-59 years, female 183.9
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 183.2
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 182.9
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 182.6
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 182.2
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 181.3
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 180.6
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 180.5
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 180.4
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 179.8
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 177.2
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 176.1
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 174.0
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 173.2
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 169.4
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 163.5
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 161.5
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 160.3
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 159.5
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 159.3
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 158.6
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 155.4
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 154.4
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 153.5
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 152.9
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 148.7
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 145.8
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 144.4
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 140.0
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 138.0
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 134.8
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 128.3
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 120.6
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 117.5
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 491.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 491.0
FF:10204-103F6 68 years, female 491.0

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