HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:134.9 nTPM
HPA:134.9 nTPM
GTEx:143.9 nTPM
FANTOM5:217.7 Scaled Tags Per Million
Pig:89.5 nTPM
Mouse:71.7 nTPM
Allen mouse:5.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042394
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 134.9
Sample id Sample description nTPM
Hippocampus
nTPM: 106.4
1898 Male, age 80, left hemisphere 138.6
1855 Male, age 76, left hemisphere 120.4
2621 Female, age 67, right hemisphere 119.6
2148 Female, age 91, left hemisphere 105.2
1911 Female, age 85, right hemisphere 77.6
2529 Female, age 94, left hemisphere 77.1
Dentate gyrus
nTPM: 112.3
2530 Female, age 94, left hemisphere 138.8
1927 Female, age 91, both hemispheres 138.0
2010 Male, age 76, both hemispheres 110.8
2531 Female, age 67, both hemispheres 101.2
2246 Female, age 85, both hemispheres 93.7
2528 Male, age 74, both hemispheres 91.2
Entorhinal gyrus
nTPM: 103.0
2613 Female, age 94, left hemisphere 128.6
2764 Male, age 80, right hemisphere 121.1
1938 Female, age 85, left hemisphere 110.8
1787 Male, age 76, left hemisphere 100.7
2686 Male, age 75, right hemisphere 83.1
2117 Female, age 91, right hemisphere 73.5
Hippocampus, CA1
nTPM: 121.8
2749 Male, age 80, left hemisphere 181.3
2082 Female, age 91, right hemisphere 122.2
1873 Female, age 85, both hemispheres 106.1
2045 Male, age 76, both hemispheres 101.5
2527 Male, age 74, both hemispheres 98.0
Hippocampus, CA2
nTPM: 114.9
1892 Male, age 76, both hemispheres 139.1
1963 Male, age 80, left hemisphere 133.6
2437 Female, age 94, left hemisphere 127.8
2249 Male, age 74, both hemispheres 100.6
2113 Female, age 91, right hemisphere 98.8
1940 Female, age 85, left hemisphere 89.6
Hippocampus, CA3
nTPM: 115.4
2137 Male, age 80, left hemisphere 150.7
2861 Female, age 67, both hemispheres 134.4
1867 Male, age 76, both hemispheres 111.7
2436 Male, age 74, both hemispheres 108.0
2620 Female, age 94, left hemisphere 106.8
1891 Female, age 85, both hemispheres 80.9
Parahippocampal cortex
nTPM: 104.8
2250 Female, age 67, right hemisphere 126.2
2693 Female, age 94, both hemispheres 113.2
2245 Female, age 91, both hemispheres 112.6
1850 Male, age 80, both hemispheres 112.5
1990 Female, age 91, right hemisphere 107.6
1933 Female, age 85, both hemispheres 104.6
2622 Female, age 67, right hemisphere 100.8
2532 Female, age 72, left hemisphere 100.1
2018 Male, age 76, both hemispheres 93.0
2692 Male, age 74, both hemispheres 77.5
Perirhinal gyrus
nTPM: 134.9
1847 Female, age 91, left hemisphere 171.2
2521 Female, age 94, right hemisphere 145.1
1794 Male, age 80, right hemisphere 142.3
1841 Female, age 85, right hemisphere 114.8
2848 Male, age 76, right hemisphere 100.9
Subiculum
nTPM: 91.2
1977 Female, age 85, both hemispheres 107.9
1901 Male, age 80, both hemispheres 103.7
2438 Female, age 94, left hemisphere 100.2
2619 Male, age 74, both hemispheres 83.3
2729 Female, age 91, right hemisphere 78.9
2042 Male, age 76, both hemispheres 73.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 143.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 143.9
Samples: 197

Max nTPM: 429.8
Min nTPM: 21.3
Std nTPM: 74.6
Median nTPM: 136.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 429.8
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 337.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 336.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 323.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 308.5
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 308.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 303.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 296.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 293.7
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 283.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 278.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 217.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 217.7
FF:10169-103B7 60 years, female 269.9
FF:10153-102I9 76 years, female 165.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 89.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 75.6
Samples: 4

Max nTPM: 96.3
Min nTPM: 50.7
Sample A Female 96.3
Sample B Female 83.3
Sample C Male 72.2
Sample D Male 50.7
Entorhinal cortex
nTPM: 83.7
Samples: 4

Max nTPM: 89.1
Min nTPM: 79.1
Sample A Female 89.1
Sample B Female 79.1
Sample C Male 86.6
Sample D Male 79.9
Subiculum
nTPM: 85.5
Samples: 4

Max nTPM: 106.7
Min nTPM: 74.1
Sample A Female 106.7
Sample B Female 74.1
Sample C Male 86.5
Sample D Male 74.7
Ventral hippocampus
nTPM: 89.5
Samples: 4

Max nTPM: 124.0
Min nTPM: 58.8
Sample A Female 88.4
Sample B Female 58.8
Sample C Male 124.0
Sample D Male 86.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 71.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 71.7
Samples: 4

Max nTPM: 79.6
Min nTPM: 68.1
Sample A Male 69.3
Sample B Male 68.1
Sample C Female 69.8
Sample D Female 79.6
Hippocampal formation
nTPM: 65.6
Samples: 4

Max nTPM: 71.9
Min nTPM: 62.0
Sample A Male 63.6
Sample B Male 62.0
Sample C Female 64.9
Sample D Female 71.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.2
68798085 Antisense, RP_050215_01_G03, Mouse strain C57BL/6J (56 days, male) 5.2

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