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A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
Protein expressioni
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 55.6
Min nTPM: 6.5
Std nTPM: 8.0
Median nTPM:
308_1
70 years, female
55.6
163_1
78 years, male
44.6
379_1
60 years, male
41.1
495_1
57 years, female
39.4
173_1
67 years, male
38.5
322_1
76 years, male
38.0
452_1
88 years, female
36.5
139_1
64 years, female
35.9
120_1
70 years, female
34.9
351_1
91 years, male
33.8
356_1
87 years, female
32.6
353_1
82 years, female
31.3
319_1
81 years, male
31.2
354_1
81 years, female
31.1
41_1
94 years, female
31.0
406_1
79 years, male
30.8
295_1
61 years, female
30.7
6_1
73 years, female
30.0
377_1
82 years, female
29.4
17_1
71 years, male
29.3
375_1
74 years, female
29.3
177_1
74 years, male
29.0
266_1
85 years, male
28.5
396_1
62 years, male
28.5
4_1
88 years, female
27.8
386_1
76 years, male
27.7
394_1
75 years, female
27.5
317_1
60 years, male
27.1
251_1
78 years, male
27.0
293_1
68 years, female
27.0
254_1
77 years, female
26.6
218_1
71 years, female
26.2
313_1
79 years, female
25.6
288_1
66 years, female
25.2
506_1
65 years, male
25.2
404_1
82 years, female
25.1
315_1
62 years, female
24.7
2_1
77 years, female
24.5
349_1
83 years, male
24.2
335_1
73 years, female
24.0
352_1
62 years, male
24.0
35_1
74 years, female
23.9
384_1
83 years, male
23.6
189_1
76 years, male
23.4
307_1
66 years, female
23.3
320_1
89 years, female
23.2
292_1
71 years, male
22.9
350_1
84 years, female
22.5
316_1
62 years, male
22.3
347_1
72 years, male
21.9
491_1
89 years, female
21.9
376_1
75 years, female
21.8
480_1
63 years, male
21.8
172_1
72 years, female
21.7
321_1
62 years, female
21.4
286_1
68 years, female
21.2
503_1
68 years, male
21.2
355_1
70 years, female
21.0
99_1
64 years, male
20.9
119_1
70 years, female
20.8
32_1
67 years, male
20.7
447_1
81 years, male
20.7
517_1
88 years, male
20.7
405_1
91 years, male
20.1
499_1
55 years, female
20.1
415_1
77 years, female
18.9
526_1
61 years, male
18.8
246_1
77 years, male
18.7
324_1
76 years, male
18.4
348_1
84 years, male
17.8
137_1
83 years, male
17.7
413_1
59 years, female
17.7
501_1
88 years, male
17.6
243_1
75 years, male
17.5
265_1
87 years, male
17.5
518_1
75 years, female
17.5
18_1
88 years, male
16.9
414_1
84 years, female
16.7
318_1
68 years, male
16.5
42_1
85 years, male
16.4
109_1
81 years, female
16.2
311_1
78 years, male
16.2
115_1
83 years, male
16.1
468_1
89 years, male
16.1
490_1
67 years, female
16.1
389_1
86 years, female
15.9
466_1
57 years, female
15.8
145_1
84 years, male
15.4
126_1
63 years, male
15.2
89_1
63 years, male
15.0
425_1
59 years, female
15.0
153_1
70 years, female
14.9
117_1
61 years, male
14.8
314_1
67 years, male
14.3
229_1
69 years, female
13.9
291_1
76 years, male
13.8
9_1
66 years, female
13.7
142_1
61 years, female
13.6
237_1
82 years, male
13.2
264_1
73 years, female
12.2
43_1
64 years, female
12.0
81_1
67 years, male
11.4
162_1
79 years, female
10.6
149_1
88 years, male
8.6
217_1
76 years, male
6.5
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
