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SLC3A2
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  • SLC3A2
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:133.0 nTPM
FANTOM5:105.0 Scaled Tags Per Million
Pig:85.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA017980Antibody CAB010455
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 133.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 133.0
Samples: 246

Max nTPM: 900.0
Min nTPM: 39.0
Std nTPM: 73.5
Median nTPM: 116.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 900.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 412.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 355.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 311.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 303.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 300.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 294.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 272.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 259.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 257.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 250.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 247.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 236.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 235.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 230.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 229.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 227.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 225.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 221.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 216.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 214.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 212.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 209.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 208.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 207.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 206.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 202.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 201.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 191.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 184.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 184.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 183.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 183.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 182.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 180.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 179.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 178.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 175.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 174.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 173.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 171.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 168.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 167.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 167.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 165.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 165.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 164.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 164.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 163.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 163.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 163.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 163.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 162.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 161.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 157.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 157.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 157.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 156.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 156.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 154.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 153.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 153.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 152.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 151.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 150.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 149.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 149.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 146.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 146.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 145.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 145.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 145.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 145.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 144.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 143.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 142.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 142.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 141.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 139.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 139.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 139.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 139.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 138.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 137.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 137.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 136.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 135.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 135.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 135.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 133.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 133.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 133.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 132.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 132.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 131.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 131.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 131.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 129.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 129.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 128.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 127.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 127.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 127.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 127.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 126.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 125.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 125.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 124.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 124.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 121.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 120.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 120.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 119.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 119.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 119.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 119.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 118.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 118.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 117.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 116.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 116.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 116.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 116.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 116.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 116.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 116.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 115.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 115.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 115.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 115.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 114.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 113.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 113.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 112.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 112.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 112.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 111.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 109.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 109.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 109.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 109.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 109.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 108.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 108.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 108.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 108.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 107.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 107.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 107.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 107.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 107.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 106.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 106.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 105.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 105.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 105.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 104.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 104.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 104.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 103.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 102.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 102.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 102.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 102.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 100.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 100.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 99.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 98.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 98.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 98.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 98.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 97.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 97.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 97.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 97.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 95.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 95.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 94.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 94.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 93.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 93.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 93.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 93.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 93.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 93.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 92.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 92.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 91.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 91.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 91.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 91.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 91.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 91.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 90.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 90.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 90.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 89.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 89.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 88.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 88.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 88.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 88.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 87.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 86.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 86.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 86.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 86.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 84.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 84.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 83.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 83.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 83.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 81.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 81.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 79.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 79.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 79.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 79.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 79.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 78.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 78.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 78.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 78.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 77.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 77.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 76.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 75.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 73.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 72.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 72.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 71.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 71.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 69.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 67.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 66.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 63.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 63.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 62.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 60.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 59.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 58.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 54.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 50.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 47.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 41.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 39.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 105.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 105.0
FF:10164-103B2 76 years, female 105.0

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 85.6
Pig sample Sample description nTPM
Caudate
nTPM: 85.6
Samples: 4

Max nTPM: 108.8
Min nTPM: 68.1
Sample A Female 68.1
Sample B Female 91.0
Sample C Male 108.8
Sample D Male 74.4

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