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TISSUE PRIMARY DATA RETINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Eye
Retina
RETINA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:273.3 nTPM
GTEx:273.3 nTPM
FANTOM5:70.0 Scaled Tags Per Million

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 273.3
GTEx sample id Sample description nTPM
Retina
Average nTPM: 273.3
Samples: 105

Max nTPM: 396.8
Min nTPM: 92.1
Std nTPM: 57.9
Median nTPM:
246_1 77 years, male 396.8
321_1 62 years, female 389.4
17_1 71 years, male 386.2
404_1 82 years, female 384.6
320_1 89 years, female 379.3
153_1 70 years, female 364.8
526_1 61 years, male 364.5
189_1 76 years, male 362.6
2_1 77 years, female 355.7
319_1 81 years, male 354.6
389_1 86 years, female 346.6
352_1 62 years, male 344.3
120_1 70 years, female 338.5
139_1 64 years, female 336.7
394_1 75 years, female 336.5
251_1 78 years, male 335.8
311_1 78 years, male 335.3
386_1 76 years, male 334.1
376_1 75 years, female 333.6
379_1 60 years, male 331.8
425_1 59 years, female 329.6
6_1 73 years, female 327.7
35_1 74 years, female 324.4
353_1 82 years, female 323.9
243_1 75 years, male 315.2
137_1 83 years, male 314.8
518_1 75 years, female 312.6
172_1 72 years, female 308.3
126_1 63 years, male 306.1
293_1 68 years, female 303.3
377_1 82 years, female 301.4
322_1 76 years, male 300.7
355_1 70 years, female 300.6
495_1 57 years, female 300.2
18_1 88 years, male 298.2
396_1 62 years, male 297.1
292_1 71 years, male 295.9
229_1 69 years, female 293.3
266_1 85 years, male 290.6
447_1 81 years, male 288.3
109_1 81 years, female 286.9
307_1 66 years, female 282.0
347_1 72 years, male 281.6
286_1 68 years, female 281.3
218_1 71 years, female 280.9
318_1 68 years, male 280.6
295_1 61 years, female 280.1
237_1 82 years, male 278.0
4_1 88 years, female 276.7
217_1 76 years, male 276.7
480_1 63 years, male 275.7
468_1 89 years, male 274.7
503_1 68 years, male 273.1
99_1 64 years, male 272.9
452_1 88 years, female 271.6
406_1 79 years, male 269.4
254_1 77 years, female 268.4
349_1 83 years, male 265.7
265_1 87 years, male 265.3
315_1 62 years, female 262.3
350_1 84 years, female 262.0
115_1 83 years, male 259.5
499_1 55 years, female 259.4
9_1 66 years, female 258.7
405_1 91 years, male 256.1
316_1 62 years, male 255.9
163_1 78 years, male 254.7
506_1 65 years, male 252.3
317_1 60 years, male 251.4
264_1 73 years, female 250.4
145_1 84 years, male 250.0
335_1 73 years, female 249.8
162_1 79 years, female 248.9
288_1 66 years, female 248.2
348_1 84 years, male 245.4
384_1 83 years, male 245.2
351_1 91 years, male 242.3
356_1 87 years, female 241.9
313_1 79 years, female 240.6
177_1 74 years, male 239.2
142_1 61 years, female 239.1
415_1 77 years, female 238.5
173_1 67 years, male 237.5
324_1 76 years, male 227.8
517_1 88 years, male 225.2
314_1 67 years, male 220.5
414_1 84 years, female 219.2
119_1 70 years, female 217.8
41_1 94 years, female 214.1
375_1 74 years, female 212.0
354_1 81 years, female 211.8
291_1 76 years, male 208.0
117_1 61 years, male 205.2
466_1 57 years, female 201.9
89_1 63 years, male 194.3
308_1 70 years, female 192.5
81_1 67 years, male 187.8
32_1 67 years, male 186.6
42_1 85 years, male 185.7
501_1 88 years, male 184.9
43_1 64 years, female 171.5
413_1 59 years, female 162.9
491_1 89 years, female 155.9
149_1 88 years, male 145.0
490_1 67 years, female 92.1
Show allShow less

RETINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 70.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Retina
Scaled Tags Per Million: 70.0
FF:10030-101E3 24-65 years, mixed 70.0

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