HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:24.5 nTPM
HPA:24.5 nTPM
GTEx:21.4 nTPM
FANTOM5:94.4 Scaled Tags Per Million
Pig:33.9 nTPM
Mouse:47.2 nTPM
Allen mouse:4.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.5
Sample id Sample description nTPM
Hippocampus
nTPM: 23.8
1898 Male, age 80, left hemisphere 26.0
2529 Female, age 94, left hemisphere 24.5
2148 Female, age 91, left hemisphere 24.1
1911 Female, age 85, right hemisphere 23.1
1855 Male, age 76, left hemisphere 22.7
2621 Female, age 67, right hemisphere 22.2
Dentate gyrus
nTPM: 23.4
2528 Male, age 74, both hemispheres 25.5
1927 Female, age 91, both hemispheres 24.3
2530 Female, age 94, left hemisphere 23.9
2246 Female, age 85, both hemispheres 23.0
2010 Male, age 76, both hemispheres 22.2
2531 Female, age 67, both hemispheres 21.3
Entorhinal gyrus
nTPM: 22.7
1938 Female, age 85, left hemisphere 24.0
2117 Female, age 91, right hemisphere 23.6
1787 Male, age 76, left hemisphere 22.9
2686 Male, age 75, right hemisphere 22.7
2764 Male, age 80, right hemisphere 21.6
2613 Female, age 94, left hemisphere 21.4
Hippocampus, CA1
nTPM: 23.8
2749 Male, age 80, left hemisphere 25.2
2527 Male, age 74, both hemispheres 25.1
1873 Female, age 85, both hemispheres 24.7
2082 Female, age 91, right hemisphere 22.6
2045 Male, age 76, both hemispheres 21.2
Hippocampus, CA2
nTPM: 23.8
1963 Male, age 80, left hemisphere 25.1
2249 Male, age 74, both hemispheres 24.7
1892 Male, age 76, both hemispheres 24.6
2113 Female, age 91, right hemisphere 23.4
1940 Female, age 85, left hemisphere 22.6
2437 Female, age 94, left hemisphere 22.1
Hippocampus, CA3
nTPM: 22.5
1891 Female, age 85, both hemispheres 23.8
2137 Male, age 80, left hemisphere 23.5
2436 Male, age 74, both hemispheres 23.3
1867 Male, age 76, both hemispheres 22.2
2861 Female, age 67, both hemispheres 21.2
2620 Female, age 94, left hemisphere 21.1
Parahippocampal cortex
nTPM: 23.6
1850 Male, age 80, both hemispheres 25.2
2693 Female, age 94, both hemispheres 24.8
1990 Female, age 91, right hemisphere 24.7
2250 Female, age 67, right hemisphere 24.6
2692 Male, age 74, both hemispheres 24.3
1933 Female, age 85, both hemispheres 24.0
2245 Female, age 91, both hemispheres 22.9
2532 Female, age 72, left hemisphere 22.9
2622 Female, age 67, right hemisphere 21.3
2018 Male, age 76, both hemispheres 20.9
Perirhinal gyrus
nTPM: 24.5
1794 Male, age 80, right hemisphere 25.3
1841 Female, age 85, right hemisphere 25.3
2521 Female, age 94, right hemisphere 24.3
1847 Female, age 91, left hemisphere 24.2
2848 Male, age 76, right hemisphere 23.4
Subiculum
nTPM: 22.7
1977 Female, age 85, both hemispheres 23.5
2729 Female, age 91, right hemisphere 23.4
2619 Male, age 74, both hemispheres 23.2
1901 Male, age 80, both hemispheres 22.8
2438 Female, age 94, left hemisphere 22.7
2042 Male, age 76, both hemispheres 20.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.4
Samples: 197

Max nTPM: 52.2
Min nTPM: 8.0
Std nTPM: 4.6
Median nTPM: 20.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 52.2
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 36.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 34.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 33.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 32.8
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 31.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 31.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 30.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 30.0
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 29.6
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 29.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 94.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 94.4
FF:10169-103B7 60 years, female 98.3
FF:10153-102I9 76 years, female 90.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 33.9
Samples: 4

Max nTPM: 43.2
Min nTPM: 24.2
Sample A Female 43.2
Sample B Female 29.4
Sample C Male 38.7
Sample D Male 24.2
Entorhinal cortex
nTPM: 26.7
Samples: 4

Max nTPM: 32.1
Min nTPM: 22.2
Sample A Female 22.2
Sample B Female 28.2
Sample C Male 32.1
Sample D Male 24.3
Subiculum
nTPM: 28.1
Samples: 4

Max nTPM: 32.8
Min nTPM: 24.5
Sample A Female 32.8
Sample B Female 24.5
Sample C Male 29.6
Sample D Male 25.5
Ventral hippocampus
nTPM: 28.7
Samples: 4

Max nTPM: 33.5
Min nTPM: 21.3
Sample A Female 30.5
Sample B Female 21.3
Sample C Male 33.5
Sample D Male 29.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 47.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 47.1
Samples: 4

Max nTPM: 49.6
Min nTPM: 44.2
Sample A Male 49.6
Sample B Male 46.6
Sample C Female 44.2
Sample D Female 47.9
Hippocampal formation
nTPM: 47.2
Samples: 4

Max nTPM: 48.0
Min nTPM: 46.4
Sample A Male 47.2
Sample B Male 47.3
Sample C Female 46.4
Sample D Female 48.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.0
69817880 Antisense, RP_050510_03_H07, Mouse strain C57BL/6J (56 days, male) 4.0

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