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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:252.2 nTPM
FANTOM5:675.2 Scaled Tags Per Million
Pig:300.5 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA069318
Glial cells Low
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 252.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 252.2
Samples: 246

Max nTPM: 556.2
Min nTPM: 19.3
Std nTPM: 137.9
Median nTPM: 251.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 556.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 549.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 539.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 533.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 529.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 514.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 505.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 502.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 501.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 500.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 499.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 485.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 472.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 470.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 464.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 463.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 462.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 460.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 446.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 444.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 440.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 439.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 438.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 437.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 433.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 433.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 429.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 428.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 425.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 419.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 416.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 414.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 414.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 414.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 412.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 411.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 408.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 407.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 407.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 407.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 405.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 404.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 403.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 396.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 396.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 394.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 391.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 389.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 386.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 385.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 385.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 384.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 383.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 383.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 381.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 379.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 378.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 377.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 377.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 372.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 372.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 367.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 365.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 364.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 363.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 361.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 361.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 360.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 356.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 350.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 349.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 347.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 347.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 343.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 341.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 338.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 337.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 335.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 333.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 332.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 331.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 327.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 325.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 325.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 321.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 318.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 317.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 316.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 314.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 311.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 309.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 309.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 307.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 304.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 300.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 300.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 292.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 289.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 288.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 286.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 286.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 285.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 285.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 283.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 282.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 274.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 274.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 273.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 273.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 272.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 272.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 271.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 270.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 270.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 269.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 268.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 267.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 263.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 262.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 261.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 259.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 258.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 254.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 249.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 248.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 246.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 245.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 242.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 240.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 240.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 236.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 236.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 233.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 232.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 231.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 229.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 229.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 226.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 219.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 215.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 213.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 212.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 212.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 210.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 207.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 206.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 205.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 200.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 198.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 196.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 195.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 195.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 194.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 194.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 188.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 187.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 184.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 183.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 179.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 178.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 177.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 176.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 175.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 175.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 170.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 164.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 162.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 159.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 159.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 156.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 156.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 154.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 153.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 153.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 147.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 145.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 144.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 143.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 142.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 140.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 137.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 134.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 132.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 131.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 128.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 124.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 121.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 120.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 118.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 116.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 113.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 112.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 110.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 110.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 109.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 109.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 108.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 106.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 104.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 104.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 103.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 99.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 99.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 98.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 97.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 93.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 92.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 88.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 87.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 82.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 81.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 80.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 79.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 79.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 79.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 78.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 75.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 74.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 73.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 73.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 70.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 70.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 69.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 66.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 66.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 66.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 61.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 60.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 57.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 57.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 55.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 54.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 53.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 53.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 51.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 47.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 47.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 40.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 38.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 38.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 27.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 27.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 26.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 25.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 25.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 19.3
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 675.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 675.2
FF:10164-103B2 76 years, female 675.2

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 300.5
Pig sample Sample description nTPM
Caudate
nTPM: 300.5
Samples: 4

Max nTPM: 393.9
Min nTPM: 221.9
Sample A Female 221.9
Sample B Female 292.7
Sample C Male 393.9
Sample D Male 293.6

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