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NDUFS5
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:546.4 nTPM
FANTOM5:414.6 Scaled Tags Per Million
Pig:127.8 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA042582
Glial cells Low
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 546.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 546.4
Samples: 246

Max nTPM: 1558.7
Min nTPM: 214.4
Std nTPM: 190.0
Median nTPM: 527.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1558.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1483.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1323.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1296.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1100.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 997.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 974.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 923.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 909.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 903.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 888.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 883.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 866.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 855.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 837.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 824.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 818.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 810.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 795.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 793.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 789.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 782.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 772.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 756.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 737.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 736.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 731.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 728.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 726.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 722.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 718.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 717.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 712.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 708.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 708.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 707.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 706.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 698.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 697.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 694.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 692.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 692.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 683.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 682.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 674.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 671.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 670.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 669.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 666.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 663.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 658.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 653.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 644.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 641.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 632.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 631.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 630.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 628.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 626.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 625.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 624.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 624.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 622.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 616.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 615.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 614.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 611.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 610.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 607.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 607.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 604.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 602.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 601.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 601.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 598.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 594.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 594.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 591.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 591.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 590.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 588.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 586.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 586.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 582.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 580.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 579.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 579.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 578.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 573.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 573.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 571.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 569.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 568.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 567.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 563.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 563.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 563.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 562.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 559.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 559.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 552.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 550.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 550.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 550.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 548.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 545.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 545.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 544.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 543.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 543.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 539.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 539.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 538.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 537.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 534.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 533.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 533.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 533.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 531.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 530.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 529.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 529.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 528.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 525.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 522.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 521.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 519.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 519.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 519.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 518.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 518.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 514.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 513.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 510.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 510.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 509.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 509.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 506.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 506.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 505.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 503.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 503.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 502.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 502.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 500.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 498.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 493.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 492.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 490.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 488.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 487.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 486.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 483.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 482.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 481.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 480.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 477.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 477.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 473.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 473.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 471.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 468.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 461.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 461.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 458.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 455.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 451.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 450.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 449.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 449.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 444.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 437.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 434.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 432.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 431.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 429.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 428.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 424.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 423.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 422.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 422.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 422.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 422.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 420.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 419.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 419.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 419.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 416.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 415.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 415.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 413.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 405.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 404.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 401.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 397.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 391.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 387.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 386.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 380.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 380.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 380.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 379.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 379.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 378.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 378.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 376.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 373.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 372.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 371.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 369.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 365.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 364.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 364.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 362.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 361.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 359.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 358.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 354.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 352.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 345.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 344.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 344.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 343.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 338.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 335.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 333.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 333.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 329.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 326.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 325.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 322.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 317.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 315.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 315.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 314.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 302.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 301.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 297.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 295.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 292.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 278.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 276.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 276.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 266.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 244.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 214.4
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 414.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 414.6
FF:10164-103B2 76 years, female 414.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 127.8
Pig sample Sample description nTPM
Caudate
nTPM: 127.8
Samples: 4

Max nTPM: 136.3
Min nTPM: 110.6
Sample A Female 129.0
Sample B Female 136.3
Sample C Male 135.2
Sample D Male 110.6

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