HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:41.8 nTPM
HPA:41.8 nTPM
GTEx:40.3 nTPM
FANTOM5:36.0 Scaled Tags Per Million
Pig:11.8 nTPM
Mouse:45.7 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041868Antibody HPA041949
Glial cells Not detectedHigh
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 41.8
Sample id Sample description nTPM
Hippocampus
nTPM: 40.8
1898 Male, age 80, left hemisphere 43.9
1855 Male, age 76, left hemisphere 41.8
2529 Female, age 94, left hemisphere 40.5
2148 Female, age 91, left hemisphere 40.1
1911 Female, age 85, right hemisphere 39.7
2621 Female, age 67, right hemisphere 38.9
Dentate gyrus
nTPM: 40.7
2010 Male, age 76, both hemispheres 41.6
2530 Female, age 94, left hemisphere 41.6
2528 Male, age 74, both hemispheres 41.5
1927 Female, age 91, both hemispheres 41.1
2246 Female, age 85, both hemispheres 39.4
2531 Female, age 67, both hemispheres 39.1
Entorhinal gyrus
nTPM: 41.3
2117 Female, age 91, right hemisphere 43.1
1938 Female, age 85, left hemisphere 42.5
2764 Male, age 80, right hemisphere 42.5
1787 Male, age 76, left hemisphere 41.5
2613 Female, age 94, left hemisphere 39.4
2686 Male, age 75, right hemisphere 39.0
Hippocampus, CA1
nTPM: 41.8
2749 Male, age 80, left hemisphere 45.7
1873 Female, age 85, both hemispheres 41.3
2527 Male, age 74, both hemispheres 40.7
2045 Male, age 76, both hemispheres 40.6
2082 Female, age 91, right hemisphere 40.5
Hippocampus, CA2
nTPM: 41.8
1963 Male, age 80, left hemisphere 45.2
1892 Male, age 76, both hemispheres 42.9
2249 Male, age 74, both hemispheres 42.8
2113 Female, age 91, right hemisphere 40.8
1940 Female, age 85, left hemisphere 40.3
2437 Female, age 94, left hemisphere 39.0
Hippocampus, CA3
nTPM: 41.4
2436 Male, age 74, both hemispheres 43.8
2137 Male, age 80, left hemisphere 42.8
1867 Male, age 76, both hemispheres 42.0
2861 Female, age 67, both hemispheres 40.0
1891 Female, age 85, both hemispheres 39.9
2620 Female, age 94, left hemisphere 39.8
Parahippocampal cortex
nTPM: 40.0
1990 Female, age 91, right hemisphere 41.3
1933 Female, age 85, both hemispheres 41.2
2250 Female, age 67, right hemisphere 41.0
1850 Male, age 80, both hemispheres 40.8
2018 Male, age 76, both hemispheres 40.8
2245 Female, age 91, both hemispheres 39.9
2692 Male, age 74, both hemispheres 39.8
2532 Female, age 72, left hemisphere 39.1
2622 Female, age 67, right hemisphere 38.7
2693 Female, age 94, both hemispheres 37.9
Perirhinal gyrus
nTPM: 40.9
1847 Female, age 91, left hemisphere 42.4
1794 Male, age 80, right hemisphere 41.7
1841 Female, age 85, right hemisphere 40.5
2521 Female, age 94, right hemisphere 40.0
2848 Male, age 76, right hemisphere 39.7
Subiculum
nTPM: 40.0
1901 Male, age 80, both hemispheres 41.8
1977 Female, age 85, both hemispheres 41.4
2042 Male, age 76, both hemispheres 40.5
2729 Female, age 91, right hemisphere 40.4
2619 Male, age 74, both hemispheres 39.5
2438 Female, age 94, left hemisphere 36.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 40.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.3
Samples: 197

Max nTPM: 81.8
Min nTPM: 23.2
Std nTPM: 10.1
Median nTPM: 38.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 81.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 81.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 70.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 68.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 66.6
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 66.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 61.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 61.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 60.8
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 59.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 59.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 36.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 36.0
FF:10169-103B7 60 years, female 46.0
FF:10153-102I9 76 years, female 25.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 11.8
Samples: 4

Max nTPM: 14.7
Min nTPM: 10.0
Sample A Female 10.0
Sample B Female 11.6
Sample C Male 10.8
Sample D Male 14.7
Entorhinal cortex
nTPM: 11.3
Samples: 4

Max nTPM: 12.5
Min nTPM: 10.0
Sample A Female 10.0
Sample B Female 11.4
Sample C Male 11.2
Sample D Male 12.5
Subiculum
nTPM: 11.1
Samples: 4

Max nTPM: 12.3
Min nTPM: 9.0
Sample A Female 9.0
Sample B Female 10.9
Sample C Male 12.1
Sample D Male 12.3
Ventral hippocampus
nTPM: 11.1
Samples: 4

Max nTPM: 11.9
Min nTPM: 10.1
Sample A Female 10.1
Sample B Female 11.1
Sample C Male 11.4
Sample D Male 11.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 45.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 39.0
Samples: 4

Max nTPM: 43.5
Min nTPM: 36.1
Sample A Male 36.1
Sample B Male 36.2
Sample C Female 43.5
Sample D Female 40.3
Hippocampal formation
nTPM: 45.8
Samples: 4

Max nTPM: 54.2
Min nTPM: 40.1
Sample A Male 46.9
Sample B Male 40.1
Sample C Female 41.8
Sample D Female 54.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
69015745 Antisense, RP_050315_01_F04, Mouse strain C57BL/6J (56 days, male) 0.4

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