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AHCYL1
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  • AHCYL1
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:204.3 nTPM
FANTOM5:528.9 Scaled Tags Per Million
Pig:146.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA042589
Glial cells Not detected
Neuronal cells Low



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 204.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 204.3
Samples: 246

Max nTPM: 610.2
Min nTPM: 44.5
Std nTPM: 83.6
Median nTPM: 186.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 610.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 517.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 500.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 418.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 415.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 408.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 407.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 388.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 386.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 382.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 381.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 377.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 357.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 349.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 347.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 345.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 342.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 342.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 341.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 330.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 327.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 319.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 318.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 314.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 311.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 309.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 308.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 308.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 306.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 306.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 305.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 303.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 301.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 298.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 295.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 291.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 282.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 280.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 280.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 278.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 276.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 274.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 270.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 269.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 268.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 266.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 265.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 264.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 262.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 257.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 256.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 254.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 253.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 252.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 252.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 249.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 249.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 248.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 245.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 244.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 243.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 243.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 242.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 242.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 239.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 236.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 236.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 235.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 234.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 233.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 232.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 232.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 232.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 231.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 230.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 229.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 229.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 229.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 227.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 226.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 226.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 225.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 224.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 224.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 223.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 223.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 222.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 222.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 221.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 220.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 219.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 218.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 217.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 217.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 217.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 214.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 213.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 213.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 209.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 209.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 209.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 208.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 207.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 206.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 205.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 204.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 203.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 200.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 199.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 198.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 197.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 197.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 196.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 196.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 195.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 193.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 192.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 190.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 188.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 188.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 187.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 186.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 186.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 186.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 186.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 185.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 184.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 184.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 183.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 183.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 182.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 182.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 179.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 178.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 178.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 178.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 178.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 177.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 177.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 176.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 176.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 176.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 175.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 173.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 173.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 172.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 171.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 171.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 170.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 170.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 169.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 169.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 169.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 169.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 168.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 168.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 166.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 166.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 165.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 165.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 160.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 158.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 158.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 157.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 157.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 156.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 156.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 156.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 155.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 155.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 154.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 154.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 153.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 153.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 153.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 152.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 151.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 151.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 149.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 149.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 149.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 148.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 145.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 145.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 144.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 144.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 144.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 143.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 143.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 142.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 142.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 142.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 141.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 140.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 140.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 139.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 137.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 137.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 137.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 137.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 136.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 134.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 132.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 132.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 132.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 130.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 129.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 128.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 128.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 127.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 125.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 125.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 125.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 125.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 124.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 124.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 123.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 122.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 122.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 121.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 121.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 120.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 120.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 117.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 116.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 115.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 113.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 112.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 111.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 111.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 110.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 109.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 108.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 99.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 99.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 98.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 92.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 84.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 83.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 82.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 71.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 68.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 67.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 58.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 50.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 44.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 528.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 528.9
FF:10164-103B2 76 years, female 528.9

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 146.2
Pig sample Sample description nTPM
Caudate
nTPM: 146.2
Samples: 4

Max nTPM: 167.3
Min nTPM: 123.2
Sample A Female 123.2
Sample B Female 162.8
Sample C Male 167.3
Sample D Male 131.6

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