HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:41.4 nTPM
HPA:41.4 nTPM
GTEx:22.4 nTPM
FANTOM5:55.0 Scaled Tags Per Million
Pig:54.7 nTPM
Mouse:66.5 nTPM
Allen mouse:12.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 41.4
Sample id Sample description nTPM
Hippocampus
nTPM: 32.3
1898 Male, age 80, left hemisphere 40.3
1855 Male, age 76, left hemisphere 35.1
2621 Female, age 67, right hemisphere 33.3
1911 Female, age 85, right hemisphere 33.0
2529 Female, age 94, left hemisphere 26.1
2148 Female, age 91, left hemisphere 26.0
Dentate gyrus
nTPM: 31.6
2010 Male, age 76, both hemispheres 41.1
1927 Female, age 91, both hemispheres 35.7
2530 Female, age 94, left hemisphere 32.9
2246 Female, age 85, both hemispheres 30.8
2528 Male, age 74, both hemispheres 26.8
2531 Female, age 67, both hemispheres 22.4
Entorhinal gyrus
nTPM: 35.5
2764 Male, age 80, right hemisphere 44.0
1938 Female, age 85, left hemisphere 38.8
1787 Male, age 76, left hemisphere 36.8
2613 Female, age 94, left hemisphere 32.7
2117 Female, age 91, right hemisphere 30.6
2686 Male, age 75, right hemisphere 30.0
Hippocampus, CA1
nTPM: 40.4
2749 Male, age 80, left hemisphere 71.7
1873 Female, age 85, both hemispheres 40.2
2082 Female, age 91, right hemisphere 31.0
2045 Male, age 76, both hemispheres 30.6
2527 Male, age 74, both hemispheres 28.7
Hippocampus, CA2
nTPM: 36.8
1963 Male, age 80, left hemisphere 47.8
1892 Male, age 76, both hemispheres 46.0
1940 Female, age 85, left hemisphere 38.4
2249 Male, age 74, both hemispheres 30.9
2113 Female, age 91, right hemisphere 29.8
2437 Female, age 94, left hemisphere 28.0
Hippocampus, CA3
nTPM: 35.2
2137 Male, age 80, left hemisphere 61.5
1867 Male, age 76, both hemispheres 41.9
1891 Female, age 85, both hemispheres 32.4
2620 Female, age 94, left hemisphere 26.4
2861 Female, age 67, both hemispheres 24.4
2436 Male, age 74, both hemispheres 24.3
Parahippocampal cortex
nTPM: 34.9
1850 Male, age 80, both hemispheres 40.6
2018 Male, age 76, both hemispheres 40.4
2693 Female, age 94, both hemispheres 39.7
1990 Female, age 91, right hemisphere 35.9
2532 Female, age 72, left hemisphere 35.5
1933 Female, age 85, both hemispheres 35.4
2245 Female, age 91, both hemispheres 34.9
2250 Female, age 67, right hemisphere 29.9
2622 Female, age 67, right hemisphere 28.9
2692 Male, age 74, both hemispheres 27.6
Perirhinal gyrus
nTPM: 41.4
1794 Male, age 80, right hemisphere 45.4
2521 Female, age 94, right hemisphere 43.8
1847 Female, age 91, left hemisphere 40.8
1841 Female, age 85, right hemisphere 39.2
2848 Male, age 76, right hemisphere 37.9
Subiculum
nTPM: 33.9
1901 Male, age 80, both hemispheres 44.7
1977 Female, age 85, both hemispheres 40.7
2042 Male, age 76, both hemispheres 37.8
2438 Female, age 94, left hemisphere 28.2
2619 Male, age 74, both hemispheres 26.7
2729 Female, age 91, right hemisphere 25.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.4
Samples: 197

Max nTPM: 60.3
Min nTPM: 5.6
Std nTPM: 8.5
Median nTPM: 21.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 60.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 43.9
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 43.5
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 43.4
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 42.4
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 41.9
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 41.4
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 40.1
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 40.1
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 39.5
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 38.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 55.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 55.0
FF:10169-103B7 60 years, female 69.0
FF:10153-102I9 76 years, female 41.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 54.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 54.7
Samples: 4

Max nTPM: 66.2
Min nTPM: 44.4
Sample A Female 66.2
Sample B Female 54.7
Sample C Male 44.4
Sample D Male 53.6
Entorhinal cortex
nTPM: 42.8
Samples: 4

Max nTPM: 50.9
Min nTPM: 36.0
Sample A Female 42.8
Sample B Female 50.9
Sample C Male 41.3
Sample D Male 36.0
Subiculum
nTPM: 39.2
Samples: 4

Max nTPM: 56.0
Min nTPM: 30.1
Sample A Female 56.0
Sample B Female 36.1
Sample C Male 30.1
Sample D Male 34.4
Ventral hippocampus
nTPM: 41.0
Samples: 4

Max nTPM: 50.3
Min nTPM: 35.1
Sample A Female 38.3
Sample B Female 35.1
Sample C Male 40.3
Sample D Male 50.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 66.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 61.9
Samples: 4

Max nTPM: 67.0
Min nTPM: 56.1
Sample A Male 58.8
Sample B Male 65.8
Sample C Female 56.1
Sample D Female 67.0
Hippocampal formation
nTPM: 66.5
Samples: 4

Max nTPM: 78.8
Min nTPM: 53.0
Sample A Male 63.7
Sample B Male 70.5
Sample C Female 78.8
Sample D Female 53.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.5
74657928 Antisense, RP_060220_02_F07, Mouse strain C57BL/6J (56 days, male) 14.0
69549628 Antisense, RP_050301_01_D11, Mouse strain C57BL/6J (56 days, male) 11.0

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