HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:69.4 nTPM
HPA:69.4 nTPM
GTEx:54.4 nTPM
FANTOM5:11.4 Scaled Tags Per Million
Pig:10.2 nTPM
Mouse:9.1 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035082
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 69.4
Sample id Sample description nTPM
Hippocampus
nTPM: 69.4
1855 Male, age 76, left hemisphere 70.8
2148 Female, age 91, left hemisphere 70.6
2529 Female, age 94, left hemisphere 70.1
1898 Male, age 80, left hemisphere 69.0
1911 Female, age 85, right hemisphere 69.0
2621 Female, age 67, right hemisphere 67.2
Dentate gyrus
nTPM: 67.0
2010 Male, age 76, both hemispheres 69.0
2530 Female, age 94, left hemisphere 68.9
2246 Female, age 85, both hemispheres 66.8
2528 Male, age 74, both hemispheres 66.6
2531 Female, age 67, both hemispheres 66.1
1927 Female, age 91, both hemispheres 64.5
Entorhinal gyrus
nTPM: 66.2
2117 Female, age 91, right hemisphere 68.9
2686 Male, age 75, right hemisphere 67.6
1787 Male, age 76, left hemisphere 67.5
1938 Female, age 85, left hemisphere 65.2
2764 Male, age 80, right hemisphere 65.0
2613 Female, age 94, left hemisphere 63.3
Hippocampus, CA1
nTPM: 66.8
2527 Male, age 74, both hemispheres 68.8
2082 Female, age 91, right hemisphere 68.0
2045 Male, age 76, both hemispheres 66.9
1873 Female, age 85, both hemispheres 65.9
2749 Male, age 80, left hemisphere 64.2
Hippocampus, CA2
nTPM: 66.9
1963 Male, age 80, left hemisphere 67.9
2113 Female, age 91, right hemisphere 67.8
2249 Male, age 74, both hemispheres 67.8
2437 Female, age 94, left hemisphere 66.7
1940 Female, age 85, left hemisphere 66.3
1892 Male, age 76, both hemispheres 64.9
Hippocampus, CA3
nTPM: 67.0
2861 Female, age 67, both hemispheres 69.1
1867 Male, age 76, both hemispheres 67.5
1891 Female, age 85, both hemispheres 66.8
2137 Male, age 80, left hemisphere 66.5
2620 Female, age 94, left hemisphere 66.4
2436 Male, age 74, both hemispheres 65.9
Parahippocampal cortex
nTPM: 65.6
2018 Male, age 76, both hemispheres 69.0
1990 Female, age 91, right hemisphere 66.8
1850 Male, age 80, both hemispheres 65.7
2245 Female, age 91, both hemispheres 65.5
2532 Female, age 72, left hemisphere 65.4
2692 Male, age 74, both hemispheres 65.2
2622 Female, age 67, right hemisphere 65.1
1933 Female, age 85, both hemispheres 65.0
2250 Female, age 67, right hemisphere 64.8
2693 Female, age 94, both hemispheres 62.9
Perirhinal gyrus
nTPM: 65.4
1794 Male, age 80, right hemisphere 67.3
1841 Female, age 85, right hemisphere 65.6
1847 Female, age 91, left hemisphere 65.6
2521 Female, age 94, right hemisphere 65.1
2848 Male, age 76, right hemisphere 63.6
Subiculum
nTPM: 67.3
2729 Female, age 91, right hemisphere 69.8
2619 Male, age 74, both hemispheres 69.7
2042 Male, age 76, both hemispheres 69.3
1901 Male, age 80, both hemispheres 65.5
1977 Female, age 85, both hemispheres 65.4
2438 Female, age 94, left hemisphere 64.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 54.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 54.4
Samples: 197

Max nTPM: 207.7
Min nTPM: 20.7
Std nTPM: 25.5
Median nTPM: 49.2
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 207.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 147.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 145.1
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 125.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 121.4
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 120.5
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 115.7
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 111.9
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 107.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 105.0
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 104.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.4
FF:10169-103B7 60 years, female 11.5
FF:10153-102I9 76 years, female 11.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.9
Samples: 4

Max nTPM: 11.6
Min nTPM: 5.4
Sample A Female 5.4
Sample B Female 8.5
Sample C Male 10.0
Sample D Male 11.6
Entorhinal cortex
nTPM: 10.2
Samples: 4

Max nTPM: 12.8
Min nTPM: 7.8
Sample A Female 10.2
Sample B Female 7.8
Sample C Male 9.9
Sample D Male 12.8
Subiculum
nTPM: 9.8
Samples: 4

Max nTPM: 11.4
Min nTPM: 6.3
Sample A Female 6.3
Sample B Female 11.0
Sample C Male 10.6
Sample D Male 11.4
Ventral hippocampus
nTPM: 9.4
Samples: 4

Max nTPM: 11.4
Min nTPM: 7.5
Sample A Female 10.4
Sample B Female 11.4
Sample C Male 7.5
Sample D Male 8.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.2
Samples: 4

Max nTPM: 10.2
Min nTPM: 7.9
Sample A Male 9.7
Sample B Male 7.9
Sample C Female 8.8
Sample D Female 10.2
Hippocampal formation
nTPM: 7.2
Samples: 4

Max nTPM: 8.0
Min nTPM: 6.5
Sample A Male 7.5
Sample B Male 8.0
Sample C Female 6.9
Sample D Female 6.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
70194898 Antisense, RP_050517_02_A03, Mouse strain C57BL/6J (56 days, male) 0.0

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