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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:155.7 nTPM
FANTOM5:225.0 Scaled Tags Per Million
Pig:92.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA043028Antibody CAB009968
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 155.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 155.7
Samples: 246

Max nTPM: 494.1
Min nTPM: 61.6
Std nTPM: 42.3
Median nTPM: 152.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 494.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 268.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 263.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 248.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 234.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 232.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 231.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 231.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 226.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 225.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 221.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 218.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 216.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 215.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 215.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 214.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 214.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 213.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 212.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 211.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 211.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 211.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 209.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 208.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 205.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 203.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 203.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 202.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 202.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 199.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 199.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 197.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 197.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 196.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 196.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 195.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 195.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 194.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 193.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 193.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 192.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 191.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 189.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 189.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 186.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 185.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 184.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 184.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 184.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 182.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 182.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 182.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 182.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 182.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 181.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 180.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 179.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 177.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 177.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 176.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 176.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 176.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 175.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 175.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 175.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 175.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 175.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 174.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 174.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 172.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 171.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 171.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 171.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 171.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 170.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 170.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 169.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 168.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 168.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 168.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 167.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 167.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 167.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 166.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 166.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 165.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 164.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 164.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 164.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 164.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 163.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 162.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 162.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 161.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 161.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 160.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 160.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 160.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 160.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 160.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 159.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 158.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 158.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 158.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 158.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 158.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 157.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 157.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 157.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 157.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 157.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 157.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 157.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 156.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 155.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 155.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 155.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 155.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 154.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 154.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 153.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 153.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 152.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 152.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 152.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 152.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 152.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 151.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 150.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 150.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 149.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 149.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 149.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 149.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 148.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 148.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 148.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 148.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 147.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 147.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 147.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 147.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 147.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 146.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 145.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 144.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 144.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 144.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 144.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 143.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 142.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 142.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 142.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 142.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 142.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 142.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 141.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 141.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 141.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 141.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 140.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 140.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 140.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 139.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 139.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 139.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 139.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 138.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 137.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 137.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 136.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 135.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 135.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 135.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 132.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 132.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 132.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 132.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 132.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 132.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 131.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 131.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 131.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 131.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 130.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 130.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 128.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 128.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 127.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 126.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 126.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 126.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 123.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 122.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 121.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 121.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 121.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 121.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 120.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 119.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 118.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 118.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 117.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 117.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 117.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 117.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 116.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 115.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 115.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 115.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 115.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 114.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 114.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 113.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 112.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 112.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 112.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 112.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 112.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 112.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 112.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 109.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 108.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 108.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 107.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 106.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 105.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 105.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 104.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 102.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 101.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 98.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 98.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 97.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 96.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 96.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 96.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 93.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 92.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 90.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 85.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 85.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 80.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 76.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 72.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 61.6
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 225.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 225.0
FF:10164-103B2 76 years, female 225.0

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 92.1
Pig sample Sample description nTPM
Caudate
nTPM: 92.1
Samples: 4

Max nTPM: 93.8
Min nTPM: 89.6
Sample A Female 92.8
Sample B Female 92.1
Sample C Male 93.8
Sample D Male 89.6

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