HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:84.6 nTPM
HPA:84.6 nTPM
GTEx:71.3 nTPM
FANTOM5:199.8 Scaled Tags Per Million
Pig:96.4 nTPM
Mouse:99.5 nTPM
Allen mouse:12.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001359Antibody HPA016884Antibody CAB032820
Glial cells MediumMediumLow
Neuronal cells HighHighHigh






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 84.6
Sample id Sample description nTPM
Hippocampus
nTPM: 83.5
2148 Female, age 91, left hemisphere 87.5
1898 Male, age 80, left hemisphere 86.3
2529 Female, age 94, left hemisphere 84.6
1911 Female, age 85, right hemisphere 81.6
1855 Male, age 76, left hemisphere 80.9
2621 Female, age 67, right hemisphere 80.3
Dentate gyrus
nTPM: 83.6
2531 Female, age 67, both hemispheres 87.3
2010 Male, age 76, both hemispheres 87.2
2530 Female, age 94, left hemisphere 84.1
1927 Female, age 91, both hemispheres 83.9
2528 Male, age 74, both hemispheres 80.5
2246 Female, age 85, both hemispheres 78.8
Entorhinal gyrus
nTPM: 84.6
2764 Male, age 80, right hemisphere 89.4
1938 Female, age 85, left hemisphere 86.5
1787 Male, age 76, left hemisphere 86.0
2686 Male, age 75, right hemisphere 85.3
2117 Female, age 91, right hemisphere 81.3
2613 Female, age 94, left hemisphere 79.2
Hippocampus, CA1
nTPM: 82.7
2749 Male, age 80, left hemisphere 85.0
2045 Male, age 76, both hemispheres 84.1
1873 Female, age 85, both hemispheres 83.8
2082 Female, age 91, right hemisphere 80.8
2527 Male, age 74, both hemispheres 79.9
Hippocampus, CA2
nTPM: 81.1
2437 Female, age 94, left hemisphere 84.9
1892 Male, age 76, both hemispheres 83.9
1940 Female, age 85, left hemisphere 82.9
2249 Male, age 74, both hemispheres 79.6
2113 Female, age 91, right hemisphere 77.9
1963 Male, age 80, left hemisphere 77.6
Hippocampus, CA3
nTPM: 82.8
2436 Male, age 74, both hemispheres 88.0
2137 Male, age 80, left hemisphere 84.8
1867 Male, age 76, both hemispheres 84.7
2620 Female, age 94, left hemisphere 80.8
2861 Female, age 67, both hemispheres 80.1
1891 Female, age 85, both hemispheres 78.7
Parahippocampal cortex
nTPM: 82.8
1933 Female, age 85, both hemispheres 86.5
2622 Female, age 67, right hemisphere 86.5
2018 Male, age 76, both hemispheres 86.0
2250 Female, age 67, right hemisphere 84.3
1850 Male, age 80, both hemispheres 84.2
2692 Male, age 74, both hemispheres 82.1
1990 Female, age 91, right hemisphere 80.6
2245 Female, age 91, both hemispheres 80.4
2532 Female, age 72, left hemisphere 79.5
2693 Female, age 94, both hemispheres 78.1
Perirhinal gyrus
nTPM: 81.4
1847 Female, age 91, left hemisphere 82.5
1794 Male, age 80, right hemisphere 82.2
2848 Male, age 76, right hemisphere 81.4
2521 Female, age 94, right hemisphere 80.6
1841 Female, age 85, right hemisphere 80.5
Subiculum
nTPM: 81.9
2042 Male, age 76, both hemispheres 85.4
1977 Female, age 85, both hemispheres 83.5
2438 Female, age 94, left hemisphere 81.6
2619 Male, age 74, both hemispheres 80.8
1901 Male, age 80, both hemispheres 80.2
2729 Female, age 91, right hemisphere 79.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 71.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 71.3
Samples: 197

Max nTPM: 349.1
Min nTPM: 44.7
Std nTPM: 24.1
Median nTPM: 67.1
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 349.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 124.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 116.1
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 110.7
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 107.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 104.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 103.4
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 100.4
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 99.9
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 99.2
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 99.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 199.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 199.8
FF:10169-103B7 60 years, female 228.1
FF:10153-102I9 76 years, female 171.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 96.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 96.4
Samples: 4

Max nTPM: 103.2
Min nTPM: 86.4
Sample A Female 94.9
Sample B Female 86.4
Sample C Male 103.2
Sample D Male 101.2
Entorhinal cortex
nTPM: 90.3
Samples: 4

Max nTPM: 93.3
Min nTPM: 84.8
Sample A Female 91.9
Sample B Female 93.3
Sample C Male 84.8
Sample D Male 91.3
Subiculum
nTPM: 94.5
Samples: 4

Max nTPM: 104.3
Min nTPM: 90.4
Sample A Female 104.3
Sample B Female 90.4
Sample C Male 91.1
Sample D Male 92.1
Ventral hippocampus
nTPM: 87.7
Samples: 4

Max nTPM: 94.7
Min nTPM: 81.9
Sample A Female 86.8
Sample B Female 87.3
Sample C Male 81.9
Sample D Male 94.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 99.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 94.4
Samples: 4

Max nTPM: 100.1
Min nTPM: 88.6
Sample A Male 88.6
Sample B Male 90.5
Sample C Female 98.2
Sample D Female 100.1
Hippocampal formation
nTPM: 99.5
Samples: 4

Max nTPM: 104.6
Min nTPM: 96.4
Sample A Male 96.4
Sample B Male 100.3
Sample C Female 104.6
Sample D Female 96.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.7
69014464 Antisense, RP_050310_01_B08, Mouse strain C57BL/6J (56 days, male) 12.7

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