HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:37.5 nTPM
HPA:37.5 nTPM
GTEx:43.4 nTPM
FANTOM5:101.6 Scaled Tags Per Million
Pig:22.8 nTPM
Mouse:75.0 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035826
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 37.5
Sample id Sample description nTPM
Hippocampus
nTPM: 36.9
2621 Female, age 67, right hemisphere 38.7
1898 Male, age 80, left hemisphere 38.6
2529 Female, age 94, left hemisphere 37.2
1911 Female, age 85, right hemisphere 36.3
1855 Male, age 76, left hemisphere 36.1
2148 Female, age 91, left hemisphere 34.6
Dentate gyrus
nTPM: 36.3
2010 Male, age 76, both hemispheres 37.6
2530 Female, age 94, left hemisphere 37.1
2246 Female, age 85, both hemispheres 36.8
1927 Female, age 91, both hemispheres 36.5
2528 Male, age 74, both hemispheres 35.8
2531 Female, age 67, both hemispheres 34.2
Entorhinal gyrus
nTPM: 35.2
2764 Male, age 80, right hemisphere 36.1
2117 Female, age 91, right hemisphere 35.7
2686 Male, age 75, right hemisphere 35.3
1938 Female, age 85, left hemisphere 35.0
1787 Male, age 76, left hemisphere 34.8
2613 Female, age 94, left hemisphere 34.2
Hippocampus, CA1
nTPM: 35.8
1873 Female, age 85, both hemispheres 36.8
2749 Male, age 80, left hemisphere 36.8
2527 Male, age 74, both hemispheres 36.3
2045 Male, age 76, both hemispheres 35.5
2082 Female, age 91, right hemisphere 33.5
Hippocampus, CA2
nTPM: 36.7
1963 Male, age 80, left hemisphere 38.5
2249 Male, age 74, both hemispheres 38.5
1892 Male, age 76, both hemispheres 38.0
2437 Female, age 94, left hemisphere 35.5
2113 Female, age 91, right hemisphere 34.8
1940 Female, age 85, left hemisphere 34.7
Hippocampus, CA3
nTPM: 35.9
2436 Male, age 74, both hemispheres 38.3
1867 Male, age 76, both hemispheres 37.8
1891 Female, age 85, both hemispheres 36.3
2137 Male, age 80, left hemisphere 35.1
2861 Female, age 67, both hemispheres 34.0
2620 Female, age 94, left hemisphere 33.7
Parahippocampal cortex
nTPM: 35.9
2018 Male, age 76, both hemispheres 38.2
1850 Male, age 80, both hemispheres 37.1
1990 Female, age 91, right hemisphere 36.1
2245 Female, age 91, both hemispheres 36.1
2693 Female, age 94, both hemispheres 35.8
2250 Female, age 67, right hemisphere 35.7
2692 Male, age 74, both hemispheres 35.6
2532 Female, age 72, left hemisphere 35.2
1933 Female, age 85, both hemispheres 35.0
2622 Female, age 67, right hemisphere 34.3
Perirhinal gyrus
nTPM: 37.5
1794 Male, age 80, right hemisphere 38.3
1841 Female, age 85, right hemisphere 38.3
1847 Female, age 91, left hemisphere 37.6
2848 Male, age 76, right hemisphere 37.3
2521 Female, age 94, right hemisphere 35.9
Subiculum
nTPM: 36.9
2438 Female, age 94, left hemisphere 41.5
1977 Female, age 85, both hemispheres 37.5
1901 Male, age 80, both hemispheres 36.8
2729 Female, age 91, right hemisphere 35.6
2042 Male, age 76, both hemispheres 35.2
2619 Male, age 74, both hemispheres 35.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 43.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 43.4
Samples: 197

Max nTPM: 107.2
Min nTPM: 23.3
Std nTPM: 10.1
Median nTPM: 42.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 107.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 80.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 73.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 66.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 63.9
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 63.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 63.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 62.9
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 62.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 61.1
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 60.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 101.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 101.6
FF:10169-103B7 60 years, female 118.2
FF:10153-102I9 76 years, female 84.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 20.8
Samples: 4

Max nTPM: 23.9
Min nTPM: 16.7
Sample A Female 16.7
Sample B Female 22.3
Sample C Male 20.2
Sample D Male 23.9
Entorhinal cortex
nTPM: 22.8
Samples: 4

Max nTPM: 26.6
Min nTPM: 21.2
Sample A Female 22.0
Sample B Female 21.5
Sample C Male 21.2
Sample D Male 26.6
Subiculum
nTPM: 22.1
Samples: 4

Max nTPM: 24.8
Min nTPM: 17.3
Sample A Female 17.3
Sample B Female 22.8
Sample C Male 24.8
Sample D Male 23.4
Ventral hippocampus
nTPM: 22.3
Samples: 4

Max nTPM: 25.3
Min nTPM: 18.3
Sample A Female 24.1
Sample B Female 25.3
Sample C Male 18.3
Sample D Male 21.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 75.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 74.3
Samples: 4

Max nTPM: 79.3
Min nTPM: 64.9
Sample A Male 64.9
Sample B Male 79.3
Sample C Female 78.0
Sample D Female 75.0
Hippocampal formation
nTPM: 75.0
Samples: 4

Max nTPM: 89.8
Min nTPM: 67.7
Sample A Male 89.8
Sample B Male 67.7
Sample C Female 73.3
Sample D Female 69.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
68076991 Antisense, RP_040929_01_C04, Mouse strain C57BL/6J (56 days, male) 0.6

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