HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:51.6 nTPM
HPA:51.6 nTPM
GTEx:36.7 nTPM
FANTOM5:24.6 Scaled Tags Per Million
Pig:21.9 nTPM
Mouse:15.1 nTPM
Allen mouse:3.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001540
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 51.6
Sample id Sample description nTPM
Hippocampus
nTPM: 50.5
2529 Female, age 94, left hemisphere 53.2
2621 Female, age 67, right hemisphere 50.3
2148 Female, age 91, left hemisphere 50.2
1898 Male, age 80, left hemisphere 50.1
1911 Female, age 85, right hemisphere 49.8
1855 Male, age 76, left hemisphere 49.5
Dentate gyrus
nTPM: 50.0
2010 Male, age 76, both hemispheres 51.3
2246 Female, age 85, both hemispheres 50.8
2531 Female, age 67, both hemispheres 50.0
1927 Female, age 91, both hemispheres 49.9
2530 Female, age 94, left hemisphere 49.8
2528 Male, age 74, both hemispheres 48.0
Entorhinal gyrus
nTPM: 50.4
1938 Female, age 85, left hemisphere 51.0
1787 Male, age 76, left hemisphere 50.6
2117 Female, age 91, right hemisphere 50.4
2764 Male, age 80, right hemisphere 50.4
2613 Female, age 94, left hemisphere 50.1
2686 Male, age 75, right hemisphere 49.9
Hippocampus, CA1
nTPM: 49.9
2527 Male, age 74, both hemispheres 51.6
2045 Male, age 76, both hemispheres 50.2
1873 Female, age 85, both hemispheres 49.3
2749 Male, age 80, left hemisphere 49.2
2082 Female, age 91, right hemisphere 49.0
Hippocampus, CA2
nTPM: 50.6
2437 Female, age 94, left hemisphere 51.6
1892 Male, age 76, both hemispheres 51.4
2249 Male, age 74, both hemispheres 51.0
1940 Female, age 85, left hemisphere 50.3
2113 Female, age 91, right hemisphere 49.7
1963 Male, age 80, left hemisphere 49.6
Hippocampus, CA3
nTPM: 49.7
2436 Male, age 74, both hemispheres 50.9
1867 Male, age 76, both hemispheres 49.6
2620 Female, age 94, left hemisphere 49.6
1891 Female, age 85, both hemispheres 49.4
2137 Male, age 80, left hemisphere 49.3
2861 Female, age 67, both hemispheres 49.3
Parahippocampal cortex
nTPM: 50.5
2245 Female, age 91, both hemispheres 51.9
1933 Female, age 85, both hemispheres 51.7
2018 Male, age 76, both hemispheres 51.7
1850 Male, age 80, both hemispheres 51.4
1990 Female, age 91, right hemisphere 50.6
2692 Male, age 74, both hemispheres 50.1
2532 Female, age 72, left hemisphere 49.7
2250 Female, age 67, right hemisphere 49.6
2693 Female, age 94, both hemispheres 49.4
2622 Female, age 67, right hemisphere 49.3
Perirhinal gyrus
nTPM: 51.6
1794 Male, age 80, right hemisphere 52.5
1841 Female, age 85, right hemisphere 52.4
2521 Female, age 94, right hemisphere 51.2
2848 Male, age 76, right hemisphere 51.1
1847 Female, age 91, left hemisphere 50.6
Subiculum
nTPM: 50.6
2438 Female, age 94, left hemisphere 51.0
2619 Male, age 74, both hemispheres 51.0
1901 Male, age 80, both hemispheres 50.5
1977 Female, age 85, both hemispheres 50.4
2042 Male, age 76, both hemispheres 50.3
2729 Female, age 91, right hemisphere 50.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 36.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.7
Samples: 197

Max nTPM: 96.9
Min nTPM: 17.1
Std nTPM: 8.1
Median nTPM: 35.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 96.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 55.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 55.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 54.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 53.6
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 52.0
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 51.1
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 50.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 50.3
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 50.0
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 49.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 24.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.6
FF:10169-103B7 60 years, female 27.2
FF:10153-102I9 76 years, female 22.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.8
Samples: 4

Max nTPM: 24.8
Min nTPM: 18.4
Sample A Female 24.8
Sample B Female 18.4
Sample C Male 23.2
Sample D Male 20.6
Entorhinal cortex
nTPM: 22.0
Samples: 4

Max nTPM: 29.1
Min nTPM: 18.5
Sample A Female 20.4
Sample B Female 29.1
Sample C Male 18.5
Sample D Male 19.8
Subiculum
nTPM: 17.9
Samples: 4

Max nTPM: 23.1
Min nTPM: 15.7
Sample A Female 23.1
Sample B Female 16.8
Sample C Male 15.9
Sample D Male 15.7
Ventral hippocampus
nTPM: 19.1
Samples: 4

Max nTPM: 22.4
Min nTPM: 15.3
Sample A Female 21.7
Sample B Female 15.3
Sample C Male 22.4
Sample D Male 17.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.1
Samples: 4

Max nTPM: 17.1
Min nTPM: 13.3
Sample A Male 13.3
Sample B Male 15.3
Sample C Female 14.6
Sample D Female 17.1
Hippocampal formation
nTPM: 14.2
Samples: 4

Max nTPM: 15.9
Min nTPM: 12.8
Sample A Male 15.9
Sample B Male 13.3
Sample C Female 14.7
Sample D Female 12.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.5
69114902 Antisense, RP_050317_02_C08, Mouse strain C57BL/6J (56 days, male) 3.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.