PONS AND MEDULLA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:65.8 nTPM
HPA:65.8 nTPM
FANTOM5:185.3 Scaled Tags Per Million
Pig:144.1 nTPM
Mouse:134.1 nTPM
Allen mouse:8.2 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 65.8
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 48.6
2090 Male, age 80, both hemispheres 50.2
2301 Female, age 85, both hemispheres 49.1
2188 Female, age 91, both hemispheres 48.8
1984 Male, age 76, both hemispheres 46.4
Area postrema
nTPM: 65.8
2799 Male, age 61, both hemispheres 83.5
2306 Male, age 80, both hemispheres 59.6
2054 Male, age 76, both hemispheres 54.4
Cuneate nuclei
nTPM: 49.8
2376 Male, age 61, both hemispheres 54.2
2381 Male, age 80, both hemispheres 50.6
2131 Male, age 76, both hemispheres 44.7
Dorsal cochlear nucleus
nTPM: 52.0
2378 Male, age 80, both hemispheres 53.3
2802 Male, age 74, right hemisphere 53.0
2058 Male, age 76, both hemispheres 52.6
2370 Male, age 61, both hemispheres 52.5
2187 Female, age 91, both hemispheres 48.5
Dorsal medullary reticular nucleus
nTPM: 49.3
2373 Male, age 61, both hemispheres 51.9
2040 Female, age 85, both hemispheres 49.5
2088 Male, age 76, both hemispheres 46.6
Dorsal motor vagal complex
nTPM: 50.0
2797 Male, age 61, both hemispheres 57.5
2185 Male, age 76, both hemispheres 54.1
2643 Male, age 74, both hemispheres 50.1
2813 Female, age 72, unknown 49.4
2807 Female, age 85, both hemispheres 48.6
2000 Male, age 74, unknown 48.0
2133 Female, age 91, both hemispheres 47.6
2844 Male, age 55, unknown 45.1
Dorsal tegmental nucleus
nTPM: 49.7
2358 Male, age 61, both hemispheres 51.7
1936 Male, age 76, left hemisphere 50.5
2326 Male, age 74, both hemispheres 49.3
2083 Male, age 80, both hemispheres 47.5
Dorsolateral tegmental area
nTPM: 50.2
2337 Male, age 61, both hemispheres 52.3
2751 Female, age 85, both hemispheres 51.3
2654 Male, age 80, both hemispheres 50.2
2360 Male, age 74, both hemispheres 49.8
2141 Male, age 76, both hemispheres 47.2
Gigantocellular reticular nuclei, medullary
nTPM: 50.4
2314 Male, age 61, both hemispheres 52.9
1876 Female, age 85, both hemispheres 52.4
2387 Female, age 91, both hemispheres 51.6
2462 Male, age 74, both hemispheres 50.0
2022 Male, age 76, right hemisphere 48.4
2310 Male, age 80, both hemispheres 47.2
Gigantocellular reticular nuclei, pars
nTPM: 46.6
2706 Male, age 80, both hemispheres 48.7
2336 Male, age 61, both hemispheres 48.0
2330 Male, age 80, both hemispheres 47.5
2084 Female, age 85, both hemispheres 45.3
2168 Male, age 76, both hemispheres 43.5
Inferior olive
nTPM: 53.4
2178 Male, age 61, both hemispheres 56.8
2379 Male, age 80, both hemispheres 56.0
2563 Male, age 74, both hemispheres 53.9
2085 Female, age 85, both hemispheres 51.1
2628 Female, age 91, both hemispheres 49.1
Kolliker-Fuse nucleus
nTPM: 54.5
2315 Male, age 76, right hemisphere 68.6
2793 Female, age 91, left hemisphere 47.5
2163 Male, age 80, both hemispheres 47.3
Lateral lemniscal nuclei
nTPM: 47.9
2746 Female, age 85, left hemisphere 52.3
2453 Male, age 74, right hemisphere 48.1
2036 Male, age 80, both hemispheres 47.5
2320 Female, age 91, left hemisphere 46.4
2169 Male, age 76, both hemispheres 45.0
Lateral medullary reticular nucleus
nTPM: 54.1
2305 Male, age 74, both hemispheres 57.7
2804 Female, age 91, both hemispheres 55.8
2852 Male, age 80, both hemispheres 53.7
2044 Male, age 76, both hemispheres 53.1
2374 Male, age 61, both hemispheres 52.8
2190 Female, age 85, both hemispheres 51.5
Lateral parabrachial nucleus
nTPM: 56.3
2792 Male, age 76, both hemispheres 65.1
2790 Male, age 61, both hemispheres 58.8
2013 Male, age 80, both hemispheres 52.5
2139 Female, age 85, right hemisphere 49.0
Lateral vestibular nucleus
nTPM: 47.3
2311 Male, age 80, both hemispheres 49.2
2184 Male, age 76, both hemispheres 45.5
Locus coeruleus
nTPM: 46.9
2788 Male, age 74, unknown 51.9
2317 Female, age 72, unknown 47.4
2014 Male, age 55, unknown 47.3
1980 Male, age 76, both hemispheres 46.3
2162 Male, age 80, both hemispheres 45.5
2123 Female, age 91, both hemispheres 45.0
2720 Male, age 74, both hemispheres 44.8
Medial olivary nucleus
nTPM: 63.2
1962 Male, age 76, both hemispheres 69.0
1943 Male, age 61, both hemispheres 65.2
2138 Female, age 91, both hemispheres 61.6
2851 Male, age 80, both hemispheres 56.9
Medial parabrachial nucleus
nTPM: 48.7
2156 Male, age 61, both hemispheres 52.9
2854 Male, age 80, both hemispheres 49.5
2786 Male, age 76, both hemispheres 48.6
2170 Female, age 91, both hemispheres 48.1
2463 Female, age 85, right hemisphere 44.4
Medial periolivary nuclei
nTPM: 49.7
2791 Male, age 74, right hemisphere 56.1
2081 Male, age 80, both hemispheres 52.3
2063 Male, age 76, both hemispheres 49.4
2458 Female, age 91, both hemispheres 45.7
2171 Female, age 85, both hemispheres 45.0
Medial vestibular nucleus
nTPM: 49.0
2624 Male, age 61, both hemispheres 50.2
2803 Female, age 91, both hemispheres 49.9
2134 Male, age 76, both hemispheres 49.4
2801 Male, age 74, both hemispheres 49.1
2743 Female, age 85, both hemispheres 48.1
2093 Male, age 80, both hemispheres 47.1
Motor facial nucleus
nTPM: 48.2
2365 Male, age 74, right hemisphere 51.1
2795 Female, age 91, both hemispheres 49.8
2126 Male, age 61, both hemispheres 49.4
2062 Male, age 76, both hemispheres 47.3
2697 Female, age 85, both hemispheres 47.2
2327 Male, age 80, both hemispheres 44.6
Motor hypoglossal nucleus
nTPM: 49.0
2277 Male, age 76, both hemispheres 51.8
2461 Male, age 61, both hemispheres 50.7
2132 Female, age 85, both hemispheres 49.1
2125 Female, age 91, both hemispheres 47.9
2182 Male, age 80, both hemispheres 45.8
Motor trigeminal nucleus
nTPM: 46.5
2309 Male, age 76, both hemispheres 48.4
2335 Male, age 61, both hemispheres 46.9
2560 Male, age 74, both hemispheres 46.5
2079 Male, age 80, both hemispheres 46.2
2321 Female, age 91, both hemispheres 44.3
Nuclei of the trapezoid body
nTPM: 46.8
1983 Male, age 76, both hemispheres 50.0
2368 Female, age 91, both hemispheres 46.9
2735 Female, age 85, both hemispheres 46.8
2166 Male, age 80, both hemispheres 45.8
2159 Male, age 61, both hemispheres 44.4
Nucleus ambiguus
nTPM: 50.2
2071 Male, age 76, both hemispheres 63.5
2096 Female, age 85, both hemispheres 37.0
Nucleus cuneatus
nTPM: 52.3
2380 Male, age 80, both hemispheres 61.2
2808 Female, age 85, both hemispheres 57.6
2562 Male, age 61, both hemispheres 52.3
2564 Male, age 74, both hemispheres 49.0
2805 Female, age 91, both hemispheres 47.8
2100 Male, age 76, both hemispheres 46.0
Nucleus gracilis
nTPM: 54.7
2382 Male, age 80, both hemispheres 55.9
2627 Male, age 74, both hemispheres 54.3
2299 Female, age 85, both hemispheres 53.9
Nucleus raphe magnus
nTPM: 47.3
2051 Male, age 76, both hemispheres 52.7
2455 Male, age 74, both hemispheres 48.8
2459 Female, age 91, both hemispheres 47.6
2328 Male, age 80, both hemispheres 46.4
2160 Male, age 61, both hemispheres 44.8
2172 Female, age 85, both hemispheres 43.8
Nucleus raphe obscurus
nTPM: 59.1
2142 Male, age 76, midline 68.7
2845 Female, age 85, midline 54.5
2800 Male, age 61, midline 54.1
Nucleus raphe pallidus
nTPM: 61.7
1924 Male, age 61, midline 70.1
2145 Male, age 76, midline 65.7
2183 Male, age 80, midline 49.3
Nucleus tractus solitarii
nTPM: 50.5
2144 Female, age 91, right hemisphere 61.9
2656 Male, age 76, both hemispheres 50.0
2191 Female, age 85, both hemispheres 46.1
2307 Male, age 80, both hemispheres 44.0
Paramedian reticular nucleus
nTPM: 52.6
2052 Male, age 76, both hemispheres 60.4
2313 Male, age 61, both hemispheres 53.0
2057 Male, age 80, both hemispheres 48.7
2050 Female, age 85, both hemispheres 48.2
Parvicellular reticular nuclei
nTPM: 48.9
2119 Male, age 80, both hemispheres 51.0
2095 Male, age 76, both hemispheres 49.7
2558 Male, age 74, both hemispheres 46.1
Parvicellular reticular nuclei, medullary
nTPM: 46.1
2091 Female, age 85, both hemispheres 46.2
2189 Female, age 91, both hemispheres 46.2
2181 Male, age 80, left hemisphere 46.0
Peritrigeminal nucleus
nTPM: 55.0
2136 Male, age 76, both hemispheres 57.5
2179 Male, age 61, both hemispheres 53.8
2067 Female, age 85, both hemispheres 53.6
Pontine nuclei
nTPM: 48.4
2454 Male, age 74, left hemisphere 51.6
2109 Female, age 72, unknown 49.7
2319 Female, age 91, both hemispheres 49.7
2115 Male, age 80, left hemisphere 48.7
1968 Male, age 76, left hemisphere 48.5
2727 Male, age 61, right hemisphere 48.1
1863 Male, age 55, unknown 47.8
2787 Female, age 85, both hemispheres 43.0
Pontine raphe nucleus
nTPM: 47.7
2853 Male, age 76, midline 49.1
2122 Female, age 85, midline 46.3
Posteroventral cochlear nucleus
nTPM: 52.6
2341 Male, age 80, both hemispheres 56.8
2371 Male, age 61, both hemispheres 54.5
2135 Female, age 91, both hemispheres 53.9
2070 Male, age 76, both hemispheres 51.4
2752 Female, age 85, both hemispheres 46.4
Prepositus hypoglossal nucleus
nTPM: 50.5
2855 Female, age 85, right hemisphere 52.8
2086 Male, age 80, both hemispheres 48.1
Principal sensory trigeminal nucleus
nTPM: 46.0
2324 Male, age 76, both hemispheres 47.6
2367 Female, age 91, left hemisphere 47.3
2008 Male, age 80, left hemisphere 46.4
2158 Male, age 61, both hemispheres 42.8
Reticular pontine nucleus, caudal
nTPM: 47.9
2092 Male, age 76, both hemispheres 50.7
2559 Male, age 74, both hemispheres 49.8
2457 Female, age 91, both hemispheres 48.1
2332 Male, age 80, right hemisphere 43.1
Reticular pontine nucleus, oral
nTPM: 48.5
1939 Male, age 80, both hemispheres 51.6
2012 Female, age 85, both hemispheres 48.4
2167 Male, age 76, both hemispheres 48.2
2361 Male, age 74, both hemispheres 47.7
2366 Female, age 91, both hemispheres 46.8
Reticulotegmental nucleus
nTPM: 46.4
2333 Male, age 80, both hemispheres 47.5
2452 Male, age 74, both hemispheres 46.7
2325 Male, age 76, both hemispheres 45.8
2322 Female, age 91, both hemispheres 45.4
Spinal trigeminal nucleus, caudal
nTPM: 48.7
2312 Male, age 61, both hemispheres 51.3
2308 Male, age 80, both hemispheres 50.3
2447 Male, age 76, both hemispheres 47.9
2642 Male, age 74, both hemispheres 47.1
2390 Female, age 91, both hemispheres 46.8
Spinal trigeminal nucleus, interpolar
nTPM: 49.9
2386 Female, age 85, both hemispheres 51.7
2066 Male, age 76, right hemisphere 51.4
2033 Male, age 80, both hemispheres 50.1
2625 Male, age 61, both hemispheres 48.8
2389 Female, age 91, both hemispheres 47.6
Spinal trigeminal nucleus, oral
nTPM: 46.7
1978 Male, age 76, both hemispheres 48.9
2164 Male, age 80, both hemispheres 46.4
2737 Female, age 85, both hemispheres 44.7
Spinal vestibular nucleus
nTPM: 49.6
2796 Male, age 61, both hemispheres 52.0
2748 Male, age 76, both hemispheres 51.9
2806 Female, age 85, both hemispheres 50.5
2384 Male, age 74, both hemispheres 49.9
2186 Female, age 91, both hemispheres 46.6
2780 Male, age 80, both hemispheres 46.5
Subcoeruleus area
nTPM: 48.2
2369 Female, age 85, left hemisphere 53.2
1958 Male, age 80, both hemispheres 48.5
2451 Male, age 74, both hemispheres 47.2
2323 Female, age 91, left hemisphere 46.5
2089 Male, age 76, left hemisphere 45.5
Superior olive
nTPM: 49.3
2364 Male, age 74, right hemisphere 53.1
2020 Male, age 76, both hemispheres 52.4
1875 Female, age 85, both hemispheres 48.8
2329 Male, age 80, right hemisphere 46.6
2561 Female, age 91, both hemispheres 45.3
Superior vestibular nucleus
nTPM: 52.8
2383 Male, age 74, both hemispheres 55.1
2061 Male, age 76, both hemispheres 52.4
2015 Male, age 80, both hemispheres 51.0
Ventral medullary reticular nucleus
nTPM: 52.3
2372 Male, age 61, both hemispheres 55.3
2060 Male, age 76, both hemispheres 49.4
Ventral periolivary nuclei
nTPM: 47.7
2023 Male, age 76, both hemispheres 54.8
2130 Female, age 85, both hemispheres 45.9
2165 Male, age 80, both hemispheres 45.5
2794 Female, age 91, left hemisphere 44.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 52.9
1986 Male, age 76, both hemispheres 55.9
2180 Male, age 61, both hemispheres 53.4
2741 Female, age 85, both hemispheres 52.4
2302 Female, age 91, both hemispheres 52.2
2118 Male, age 80, both hemispheres 50.6
Ventrolateral tegmental area, A5 NE cell group
nTPM: 49.9
2359 Male, age 61, both hemispheres 52.1
1959 Male, age 76, both hemispheres 51.2
2840 Female, age 85, both hemispheres 51.0
2161 Male, age 80, both hemispheres 50.7
2449 Male, age 74, both hemispheres 47.3
2456 Female, age 91, both hemispheres 47.3

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 185.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 127.6
FF:10165-103B3 76 years, female 140.2
FF:10182-103D2 60 years, female 115.0
Medulla oblongata
Scaled Tags Per Million: 185.3
FF:10174-103C3 60 years, female 206.9
FF:10038-101F2 18-64 years, mixed 206.3
FF:10155-103A2 76 years, female 142.9
Pons
Scaled Tags Per Million: 153.2
FF:10033-101E6 18-54 years, mixed 153.2

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 144.1
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 144.1
Samples: 4

Max nTPM: 169.3
Min nTPM: 114.2
Sample A Female 158.0
Sample B Female 114.2
Sample C Male 135.0
Sample D Male 169.3
Pons
nTPM: 117.4
Samples: 4

Max nTPM: 133.5
Min nTPM: 101.0
Sample A Female 107.6
Sample B Female 101.0
Sample C Male 127.5
Sample D Male 133.5

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 134.1
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 134.1
Samples: 4

Max nTPM: 137.5
Min nTPM: 131.7
Sample A Male 131.7
Sample B Male 133.7
Sample C Female 137.5
Sample D Female 133.4

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 8.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 6.1
68910987 Antisense, RP_050203_01_G02, Mouse strain C57BL/6J (56 days, male) 6.1
Pons
Expression energy: 8.2
68910987 Antisense, RP_050203_01_G02, Mouse strain C57BL/6J (56 days, male) 8.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.