HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:31.2 nTPM
HPA:31.2 nTPM
GTEx:52.7 nTPM
FANTOM5:64.2 Scaled Tags Per Million
Pig:60.1 nTPM
Mouse:44.1 nTPM
Allen mouse:5.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA068009
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.2
Sample id Sample description nTPM
Hippocampus
nTPM: 22.2
1911 Female, age 85, right hemisphere 27.0
2529 Female, age 94, left hemisphere 23.0
1898 Male, age 80, left hemisphere 22.1
2621 Female, age 67, right hemisphere 21.6
1855 Male, age 76, left hemisphere 20.4
2148 Female, age 91, left hemisphere 19.1
Dentate gyrus
nTPM: 23.0
2530 Female, age 94, left hemisphere 38.6
2528 Male, age 74, both hemispheres 24.5
2010 Male, age 76, both hemispheres 22.1
2246 Female, age 85, both hemispheres 19.3
2531 Female, age 67, both hemispheres 16.8
1927 Female, age 91, both hemispheres 16.5
Entorhinal gyrus
nTPM: 25.1
2117 Female, age 91, right hemisphere 43.2
2764 Male, age 80, right hemisphere 32.6
1938 Female, age 85, left hemisphere 20.8
2613 Female, age 94, left hemisphere 20.3
2686 Male, age 75, right hemisphere 17.6
1787 Male, age 76, left hemisphere 16.0
Hippocampus, CA1
nTPM: 18.2
2527 Male, age 74, both hemispheres 22.4
1873 Female, age 85, both hemispheres 20.3
2082 Female, age 91, right hemisphere 19.9
2749 Male, age 80, left hemisphere 17.9
2045 Male, age 76, both hemispheres 10.4
Hippocampus, CA2
nTPM: 24.1
1963 Male, age 80, left hemisphere 33.7
2249 Male, age 74, both hemispheres 30.2
2437 Female, age 94, left hemisphere 23.1
2113 Female, age 91, right hemisphere 22.3
1940 Female, age 85, left hemisphere 20.8
1892 Male, age 76, both hemispheres 14.4
Hippocampus, CA3
nTPM: 17.0
1891 Female, age 85, both hemispheres 34.4
1867 Male, age 76, both hemispheres 18.9
2436 Male, age 74, both hemispheres 16.8
2137 Male, age 80, left hemisphere 12.6
2620 Female, age 94, left hemisphere 10.2
2861 Female, age 67, both hemispheres 8.8
Parahippocampal cortex
nTPM: 18.7
1990 Female, age 91, right hemisphere 27.2
2532 Female, age 72, left hemisphere 25.7
2692 Male, age 74, both hemispheres 25.2
1933 Female, age 85, both hemispheres 20.2
1850 Male, age 80, both hemispheres 20.1
2245 Female, age 91, both hemispheres 19.3
2018 Male, age 76, both hemispheres 14.4
2250 Female, age 67, right hemisphere 13.9
2693 Female, age 94, both hemispheres 13.8
2622 Female, age 67, right hemisphere 7.1
Perirhinal gyrus
nTPM: 13.5
2521 Female, age 94, right hemisphere 15.6
1847 Female, age 91, left hemisphere 13.7
1794 Male, age 80, right hemisphere 12.9
2848 Male, age 76, right hemisphere 12.9
1841 Female, age 85, right hemisphere 12.3
Subiculum
nTPM: 31.2
2042 Male, age 76, both hemispheres 41.1
1901 Male, age 80, both hemispheres 40.0
1977 Female, age 85, both hemispheres 33.7
2438 Female, age 94, left hemisphere 27.1
2619 Male, age 74, both hemispheres 24.3
2729 Female, age 91, right hemisphere 21.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 52.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 52.7
Samples: 197

Max nTPM: 216.2
Min nTPM: 2.5
Std nTPM: 38.2
Median nTPM: 41.9
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 216.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 206.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 190.0
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 159.1
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 154.1
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 147.7
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 142.1
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 137.7
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 136.4
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 120.3
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 117.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 64.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 64.2
FF:10153-102I9 76 years, female 84.4
FF:10169-103B7 60 years, female 43.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 60.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 60.1
Samples: 4

Max nTPM: 91.7
Min nTPM: 26.8
Sample A Female 91.7
Sample B Female 53.2
Sample C Male 68.7
Sample D Male 26.8
Entorhinal cortex
nTPM: 20.5
Samples: 4

Max nTPM: 28.3
Min nTPM: 17.5
Sample A Female 17.5
Sample B Female 28.3
Sample C Male 18.2
Sample D Male 17.9
Subiculum
nTPM: 23.2
Samples: 4

Max nTPM: 26.7
Min nTPM: 19.6
Sample A Female 26.7
Sample B Female 25.7
Sample C Male 20.8
Sample D Male 19.6
Ventral hippocampus
nTPM: 46.2
Samples: 4

Max nTPM: 67.7
Min nTPM: 24.5
Sample A Female 47.5
Sample B Female 24.5
Sample C Male 45.0
Sample D Male 67.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 44.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.9
Samples: 4

Max nTPM: 31.8
Min nTPM: 13.3
Sample A Male 31.8
Sample B Male 20.6
Sample C Female 21.7
Sample D Female 13.3
Hippocampal formation
nTPM: 44.1
Samples: 4

Max nTPM: 60.1
Min nTPM: 34.0
Sample A Male 34.0
Sample B Male 43.3
Sample C Female 60.1
Sample D Female 38.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.3
2272 Antisense, RP_040526_02_E03, Mouse strain C57BL/6J (56 days, male) 5.3
2271 Antisense, RP_040526_02_E03, Mouse strain C57BL/6J (56 days, male) 1.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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