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RPS9
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:799.4 nTPM
FANTOM5:106.0 Scaled Tags Per Million
Pig:185.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA048746
Glial cells Not detected
Neuronal cells Low


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 799.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 799.4
Samples: 246

Max nTPM: 2108.7
Min nTPM: 396.9
Std nTPM: 258.3
Median nTPM: 738.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 2108.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1874.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 1679.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1642.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1630.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1577.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1570.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1380.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1351.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 1322.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1308.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1297.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1287.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 1243.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1241.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 1234.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 1189.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1169.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1164.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1142.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1141.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 1137.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1126.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1115.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1111.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1111.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 1108.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1106.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1104.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1100.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1084.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1080.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1073.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 1066.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 1049.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 1046.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 1027.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1022.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1015.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 1014.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1008.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1008.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 1002.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 989.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 987.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 984.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 983.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 969.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 967.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 965.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 964.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 960.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 952.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 948.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 947.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 944.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 944.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 940.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 935.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 935.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 932.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 927.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 925.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 920.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 914.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 906.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 903.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 902.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 886.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 886.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 877.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 875.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 872.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 870.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 861.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 855.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 855.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 854.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 852.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 852.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 851.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 849.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 847.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 845.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 843.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 829.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 828.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 828.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 828.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 826.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 823.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 823.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 811.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 811.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 809.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 809.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 807.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 804.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 794.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 794.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 788.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 785.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 783.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 782.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 780.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 777.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 775.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 770.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 767.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 767.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 764.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 762.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 761.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 759.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 758.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 757.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 756.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 756.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 752.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 746.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 744.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 742.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 741.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 735.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 731.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 730.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 725.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 725.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 722.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 714.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 711.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 711.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 705.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 705.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 702.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 700.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 697.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 697.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 696.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 695.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 694.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 694.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 692.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 692.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 690.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 690.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 688.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 688.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 680.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 680.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 680.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 679.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 679.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 677.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 673.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 672.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 671.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 671.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 670.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 668.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 668.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 667.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 666.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 665.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 665.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 663.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 663.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 662.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 658.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 658.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 656.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 652.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 651.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 643.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 637.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 636.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 632.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 632.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 628.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 628.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 621.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 621.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 617.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 615.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 614.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 613.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 608.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 607.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 603.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 602.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 602.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 598.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 598.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 597.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 595.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 595.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 594.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 593.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 590.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 588.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 588.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 587.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 586.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 586.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 585.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 584.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 583.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 580.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 580.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 578.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 577.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 576.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 574.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 574.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 570.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 570.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 570.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 569.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 569.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 567.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 565.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 560.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 551.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 551.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 551.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 543.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 541.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 539.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 536.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 535.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 530.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 518.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 517.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 507.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 504.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 501.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 500.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 499.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 485.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 480.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 455.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 440.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 416.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 401.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 401.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 396.9
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 106.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 106.0
FF:10164-103B2 76 years, female 106.0

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 185.0
Pig sample Sample description nTPM
Caudate
nTPM: 185.1
Samples: 4

Max nTPM: 198.0
Min nTPM: 159.1
Sample A Female 198.0
Sample B Female 192.3
Sample C Male 190.8
Sample D Male 159.1

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